Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00909 ATGTACAAAGCGCAATTAGGAGATCGTGTCGAGGGGGCTAAGATGGAGTATGGGTACGTTGAAACCGATCCAACTCGTCGGTATGGACGTTTCAAAGAAGTTCTGGGAAAAGGAGCGATGAAGACGGTATACAGGGCATTCGACGAGATATTTGGTATGGAGGTGGCATGGAACCAGGTGAAGCTTAACGATGTGTTTCGATCGCCAGATGAGTTGCAGCGGTTGTACTCTGAGGTGCACCTCCTCAGGACTCTCAACCATGATTCTATCATCCGCTTCTACACCTCTTGGATCGACGTCGATCGACGAACCTTCAACTTCATCACCGAAATGTTCACTTCCGGCACCCTCAGAGAGTACCGAAAGAGATACAAGCGGGTAGACATCAGAGCCATCAAGAACTGGGCCCGTCAAATCCTACATGGGCTTGTTTATCTACACGGTCATGATCCTCCAGTGATTCATAGAGACCTCAAGTGTGATAACATCTTTGTCAACGGCCATCTAGGACAAGTCAAGATCGGTGATCTAGGGTTAGCTGCCATCCTCCGTGGGTCCCAGGCGCACAGTGTCATAGGCACGCCTGAGTTCATGGCGCCAGAACTATATGAAGAAGAATATAACGAGCTCGTCGATATCTATTCCTTTGGCATGTGTGTGCTAGAGATGCTTACTTCCGAATACCCGTATAACGAATGCTCCAACCCAGCTCAAATCTACAAGAAAGTGACATTGGGAAAACTGCCCGATGCATTCTATCGTATTCATGACCCAGAAGCCCGAAGATTTGTGGGAAAATGTTTAGAAACTGTGTCGAAGAGACTGCCCGCCAAGGAGCTTTTGCTTGACCCGTTCCTAGCACTAGACGAAGGAAAGCTGTCGTCTCTCCCGAAGATTGGAAGTCACAAGCCAATAGCCAATGAGAATGTGCCAGAAAGCCCAGTCTACGCTCCTCCTCCTCCTCCTCCTGTCGATCCAACAAGGAGTACTGACTTGACCATCACAGGAAACATGAACCCAGAAGACGATACAATCTTTCTTAAAGTGCAGATCGCCGGTAAAGATGGTTCGGTAAGAAACATATATTTTCCCTTTGACATCGTGAGCGATACTCCGATTGATGTTGCAACCGAGATGGTGAAGGAGTTGGAAATCACCGATCGGGACCCAGTAGAGATAGCAGAGGTGATCGAGGAGGAGATTTCTGCTTTGGTACCACATTGGAAGGAATGGGATGGCCCACAAAACCATCCCCACCACAGCTTTAGCTATCAAGATGATGACGATAACGATGACGATGGGCCCCACCACCCTTTCTACTCTTTCTCCTCTTGTTCTTCCTCCCAAGCTTCGCTTTCTGGCTTGCCCCCATCACGTGGAACCCACTTTCCGCGTGGGGACGGCTTGAACTTTGGCCCAGATTGGCTTCAAGATGAGTTGTTCGTTGACGATGACACAAGCTCACAATGCTCCCTAAACTCCGGCAAATACTCCAACATGAATTACAACTCTGGAAACGAACACGACTTTGATCTCAGCCCCAGAAGAGAAGAACACCATATCTTGAAGACCCACAAGTGTACGAGCAGATTCAACCCGGAAGATAACCCAAGAACTGGTCACCACATTGGTACAAACTGCCACAAGCAATGCAGTAAGGTGTTGCTAGACTCTCATGGGGCTTCTAGTTCCCATGACCACAGGGCAATTGAGAATCCTCAACTAACAAGGATGCGATCACTGGTGGATGTACGTAGTCAGTTGTTACACCGTTCCTTGGTGGAGGAGGTGAACAAGCGTCGGTTGTTCAAGACAGTTGGAGCCGTAGAGAACATCGGATATCAAATGCCCCGCGAGTTTTCCGGTAAGGCGTCATCATCGATAGGTGTTGGTTCTGTGAGAGCTCCAAGAGTTGGGAAGAGGCAAGGATTTAAATGGTGA 1941 0.4863 MYKAQLGDRVEGAKMEYGYVETDPTRRYGRFKEVLGKGAMKTVYRAFDEIFGMEVAWNQVKLNDVFRSPDELQRLYSEVHLLRTLNHDSIIRFYTSWIDVDRRTFNFITEMFTSGTLREYRKRYKRVDIRAIKNWARQILHGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQAHSVIGTPEFMAPELYEEEYNELVDIYSFGMCVLEMLTSEYPYNECSNPAQIYKKVTLGKLPDAFYRIHDPEARRFVGKCLETVSKRLPAKELLLDPFLALDEGKLSSLPKIGSHKPIANENVPESPVYAPPPPPPVDPTRSTDLTITGNMNPEDDTIFLKVQIAGKDGSVRNIYFPFDIVSDTPIDVATEMVKELEITDRDPVEIAEVIEEEISALVPHWKEWDGPQNHPHHSFSYQDDDDNDDDGPHHPFYSFSSCSSSQASLSGLPPSRGTHFPRGDGLNFGPDWLQDELFVDDDTSSQCSLNSGKYSNMNYNSGNEHDFDLSPRREEHHILKTHKCTSRFNPEDNPRTGHHIGTNCHKQCSKVLLDSHGASSSHDHRAIENPQLTRMRSLVDVRSQLLHRSLVEEVNKRRLFKTVGAVENIGYQMPREFSGKASSSIGVGSVRAPRVGKRQGFKW* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00909 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Eupl01g00909 646 CDD STKc_WNK 27 286 - -
Eupl01g00909 646 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Eupl01g00909 646 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Eupl01g00909 646 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00909 646 MobiDBLite consensus disorder prediction 409 466 - -
Eupl01g00909 646 SUPERFAMILY Protein kinase-like (PK-like) 31 287 IPR011009 -
Eupl01g00909 646 MobiDBLite consensus disorder prediction 409 436 - -
Eupl01g00909 646 MobiDBLite consensus disorder prediction 313 327 - -
Eupl01g00909 646 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Eupl01g00909 646 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00909 646 Gene3D - 347 410 - -
Eupl01g00909 646 MobiDBLite consensus disorder prediction 440 456 - -
Eupl01g00909 646 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 16 596 - -
Eupl01g00909 646 Gene3D Transferase(Phosphotransferase) domain 1 112 291 - -
Eupl01g00909 646 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00909 646 MobiDBLite consensus disorder prediction 304 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00909 Eupl-Chr1 27763933 27773462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00909 18 432 MAP Kinase Kinase Kinase AT3G51630 73.381 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Eupl01g00909 Pkinase 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00909 K08867 - msin:131223815 884.789