Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00888 ATGGAAATGCAAGATCCTACAAACCATAGCTCTGAAAATGTCCAAAAGACAACAGGGACGACGATGCTCGGAAACCCTAACATCTCCTTCAGAGGCTCTCACCATCGGCGAGCACACTCTGAGGTGAATTTCCGGCTCCCTGACGACCTAGATCTCGTCTCTGATCCCTTCGATGCGTCGACGACGAGTTTCGACGAGATCGGATCGGAGGACGATCTTTTCTGCACTTACATGGACATTGAGAAGCTCGGATCCAGATTTGAGGATCGCCAGCCCGGAGGAAACAGGACAGGAGATTCTCAGATCGAATATGGAGGGAATTGTGTGGATCAGAATGGAGGGGGAGGAGACGTACGGACGGAGAGCGACGTTGGAGAGAAGAATATGAGGCCTCGGCATCGGCACAGCAATTCGGTAGATGGCTCTTCGATCTTGAGAGGAGAAAGTCTGTTTGGGGATGCGATGGATGCCAAGAAGGCGATGCCCCCAGATAAGCTCTCCGAACTGTGGGCACTAGATCCGAAGCGAGCTAAGAGGATTCTGGCGAATCGGCAGTCTGCTGCTCGCTCAAAAGAGCGGAAGGCACGTTATATATCGGAACTTGAGCGAAAAGTTCAGACCCTTCAAACTGAAGCAACGACTCTTTCTGCACAACTCTCACTATTCCAGAGAGATACAACAGGTCTGACTACTGAGAACACAGAGCTTAAGCTTCGGTTACAAGCTATGGAACAACAAGCACAGTTACGTGATGCTCTGAATGAAGCACTGAAGCAGGAAGTTGAGAGGCTCAAGGTTGCCACCGGAGAAATAACGAGCCCAGGTGAGACATTCAACTGGGGAATGCACCACATGCCATATATCCCATCATCCTTTTCACTTCCGCAACAACCAGGGCTGGGTGGACACCAGAACATGCAGTTGCCGCAGTTCCATCCTTCCCAGTCTACCATGACAAGCCACCCTCTGCTTGCTGCCCACTCGCATGCTCTCTCAGAGATGTGGCAGCAAGACCCACTAGGCCGATTACAGGGGCTTGATATCAATAGCAGCAGAGGATCACATTTTGTGAAATCTGAAGGTCCCTCGATCTCTGCTAGTGAAAGCAGCAGCACATTTTAA 1122 0.508 MEMQDPTNHSSENVQKTTGTTMLGNPNISFRGSHHRRAHSEVNFRLPDDLDLVSDPFDASTTSFDEIGSEDDLFCTYMDIEKLGSRFEDRQPGGNRTGDSQIEYGGNCVDQNGGGGDVRTESDVGEKNMRPRHRHSNSVDGSSILRGESLFGDAMDAKKAMPPDKLSELWALDPKRAKRILANRQSAARSKERKARYISELERKVQTLQTEATTLSAQLSLFQRDTTGLTTENTELKLRLQAMEQQAQLRDALNEALKQEVERLKVATGEITSPGETFNWGMHHMPYIPSSFSLPQQPGLGGHQNMQLPQFHPSQSTMTSHPLLAAHSHALSEMWQQDPLGRLQGLDINSSRGSHFVKSEGPSISASESSSTF* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00888 373 SMART brlzneu 171 235 IPR004827 GO:0003700|GO:0006355
Eupl01g00888 373 MobiDBLite consensus disorder prediction 87 144 - -
Eupl01g00888 373 FunFam probable transcription factor PosF21 174 227 - -
Eupl01g00888 373 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 6 358 - -
Eupl01g00888 373 Coils Coil 191 218 - -
Eupl01g00888 373 CDD bZIP_plant_RF2 176 225 IPR044759 GO:0003700|GO:0006355
Eupl01g00888 373 MobiDBLite consensus disorder prediction 120 139 - -
Eupl01g00888 373 MobiDBLite consensus disorder prediction 1 26 - -
Eupl01g00888 373 Pfam bZIP transcription factor 175 227 IPR004827 GO:0003700|GO:0006355
Eupl01g00888 373 Gene3D - 174 226 - -
Eupl01g00888 373 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 173 236 IPR004827 GO:0003700|GO:0006355
Eupl01g00888 373 MobiDBLite consensus disorder prediction 351 373 - -
Eupl01g00888 373 SUPERFAMILY Leucine zipper domain 175 226 IPR046347 GO:0003700|GO:0006355
Eupl01g00888 373 Coils Coil 239 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00888 Eupl-Chr1 27484799 27491231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00888 3 373 bZIP Transcription Factor Family AT2G40620 53.750 5.40e-112 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl01g00888 bZIP_1 5e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00888 - - ming:122082439 529.25