Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00885 ATGAGGTGTTTCACAGTCTTGAAGAGTAAAAAGAAGAAGTCCGAGCAGCCTAACTATGTCAAACGCATCAACCCTCAGGAGAGTACACCTGCAGTGCTCCCTGAACCACAGACCCACAGCCGATCTCTCCAATCCGCTCCTCCAAGCTTCAAGACCATAGCCAAACCTGTTCAACCAGTTAACCGAATCAGCAACAGTAGAACCCGGGCATTATCTGCTCCATCAAGCCTAAACGGGGTAGAGCGTGATGCTCTCTCGTCAGTTGAATATGATGAACAGGAAGAGAAGAGCCGAGGTGGATTTACAAAGGAACGTTGTGCTAGTCCACAGCCTCTTCCTCTTCCGTCGCCTCAGAGTGCCGCTGTCTTGAAGACTATGGGAAGCTTCAAGGCAGGGAATGCAAGCGGCCATATCGTCGCGTCTGGCCCTCTGCCACTTCCTCCTTTAGGAGGCCTTCGGAACTTCTCATATGAAGAGGTTGCAGATGCTTGCCACCAATTCTCACCAGACCGATGCATGTCGGGTGGTCTTTCTTCAGTAATTTATAAAGCTTCTTTTGGAGATGATGCGTTCAGTTCCAAGAAGCTGGAAGCCACTGTCACTCGCCTTCTTCCATCCACTCAGGGGTTCAGGGAGTTCATCAACGAGGTTAACATAATTGCATCTTTGCAACATCCCCAGCTATGTAAATTAGTTGGTTACCATGCACGTGAAGGCTCTGAACAACGGATGTTGGTCTATGAGAGACTCTTCCATGGAAGCTTAGACTTTCTGCTGTATGGGAGATCTGATGGGCCTCCTATTGACTGGTGTGGCAGGATGAAAGTAGCTCTCTGTGCAGCGCAGGGTCTTGCTTTTTTGCATGAAGAAGGGCCTTTTCAGGCAATGTACAATGAGTTCTCAACTGTTAACATACAGATCGACAAGGACTTTAGTGCAAAGCTTTCAGGTTATGGCTGTGTTAGCCACAGTCTAGAAGCTGAGATCTCAAATACTTCCCCAGCAGCTGCGAATCTTTCAGTGGAGACATTGGAGAGAGGACTACTCACTCCCAAGAGCAATGTATGGAGCTTTGGGATTGTTCTTCTTGAATTACTCACCGGCCGGAAGAATCTTGACAGCCGCCACCCCAAGGAAGGAAGGAACTTGGTTAAGTGGAGCCGACCTTTCCTGGCTGACGATGACCGTCTATCCCTGATCATGGATCCACGGCTAAAAGGTCGCTTCCCTGCCAAAGCAGCTCGAACTGTGGTTGACATTGCTCTAAGATGCCTCCAGAAGGATCCCTCAGAAAGACCCACCATGAGAACCATTGTTGAGTCTCTCAAAAACATCCAAGACATGAAGTACTCGCGCCGGTTCCCTCTCCAAGAGCCAGCAACAATTGCTGGAAAACAGATGTCAAGGTCTCCAAGTCTGAATGGGATTATTACCCCAGCACCCAGATTAGGTTTCCCTCCCTCTCCACCTTCAAGAACCCGGCCATCCATTTCTCCTACAAGGCGACCCTCAATGCCCATGTCGCTTCCTCCCCGATCATGTTCATCTGTGGTCTCACTGGAAGAGAACGTGTCACAGGAAAGTCGAAAATCTACCTCCTCATCGGCTCGACGGGCTGGAGTTGAAGGGTTTTGA 1635 0.4948 MRCFTVLKSKKKKSEQPNYVKRINPQESTPAVLPEPQTHSRSLQSAPPSFKTIAKPVQPVNRISNSRTRALSAPSSLNGVERDALSSVEYDEQEEKSRGGFTKERCASPQPLPLPSPQSAAVLKTMGSFKAGNASGHIVASGPLPLPPLGGLRNFSYEEVADACHQFSPDRCMSGGLSSVIYKASFGDDAFSSKKLEATVTRLLPSTQGFREFINEVNIIASLQHPQLCKLVGYHAREGSEQRMLVYERLFHGSLDFLLYGRSDGPPIDWCGRMKVALCAAQGLAFLHEEGPFQAMYNEFSTVNIQIDKDFSAKLSGYGCVSHSLEAEISNTSPAAANLSVETLERGLLTPKSNVWSFGIVLLELLTGRKNLDSRHPKEGRNLVKWSRPFLADDDRLSLIMDPRLKGRFPAKAARTVVDIALRCLQKDPSERPTMRTIVESLKNIQDMKYSRRFPLQEPATIAGKQMSRSPSLNGIITPAPRLGFPPSPPSRTRPSISPTRRPSMPMSLPPRSCSSVVSLEENVSQESRKSTSSSARRAGVEGF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00885 544 MobiDBLite consensus disorder prediction 19 49 - -
Eupl01g00885 544 Pfam Protein tyrosine and serine/threonine kinase 207 442 IPR001245 GO:0004672|GO:0006468
Eupl01g00885 544 Gene3D Transferase(Phosphotransferase) domain 1 251 459 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 1 49 - -
Eupl01g00885 544 Gene3D Phosphorylase Kinase; domain 1 149 248 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 63 115 - -
Eupl01g00885 544 SUPERFAMILY Protein kinase-like (PK-like) 146 451 IPR011009 -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 482 496 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 63 82 - -
Eupl01g00885 544 ProSiteProfiles Protein kinase domain profile. 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00885 544 PANTHER OS01G0588500 PROTEIN-RELATED 89 446 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 497 538 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 85 102 - -
Eupl01g00885 544 MobiDBLite consensus disorder prediction 463 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00885 Eupl-Chr1 27455033 27460133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00885 142 446 Receptor kinase-like Gene Family AT4G02010 37.299 3.12e-55 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Eupl01g00885 PK_Tyr_Ser-Thr 1.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00885 - - nnu:104594491 846.654