Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00882 ATGGCGTCGAAGGTTTGCATGAATGTTTCATGCGGGGCGACATCGTTGATTGAGTGGAGGAAAGGGTGGGGTCTTCGATCTGGTGGATTTGCGAATCTCTGTGACAAGTGCGGGTCTGCATATGAACAATTAGGTTTCTGTGACACATTCCACTTAAAAGAATCTGGCTGGAGGGAGTGCAGTTCTTGTGGCAAGCGTCTCCATTGTGGATGTATTGCTTCGAAATCTTTGCTTGAGCTACTTGATAATGGTGGTGTAGCGTGTATTAGCTGTGTGAAGAGTTTGGAACTTTCCTCTATCCCAAGTGATGAAAAGCCCAAAGGTTTCAGTACATCAGCAGCAGAGAATGTTGGCGAAATGCATTCAACTTTCATGGACAATAGAATAGACGGTGTTGATAACGAAAAGCTTATGCAGTTGGGCAAAAATATGGAGGGTAATGGGCAGAACAACTTGCTTCAATCTCAGAAATATGGCACAAATGGGTCTCTTGGGCAAATCAAAAGAGAGCAAGTCATGCCTTATGTAGGGGAAGATGGAAGCACGAGCTTTTCAAATTTAAATCAAGCTTTCATGGGATCATCTCAGATTGCCACACTAGATGATATTAAAGAAACTGCGGGGGTTAAAGATATGTATGAGTCACTAGCTCAGACATGCTTTAATATCACCTTGGGTGCGCCTTCTGGAACCCCAAATCTTGCACTGCCCCTTGCTGGTGTGTTTGTTGAAGGAAGGGAGCAGAGCAAAACAGCATCTCCCCTTCAACAAGGGCAAAGGTCCCGCCATCTTTTGCCCAGGCCCCTGAAGACGGGCTCTGGCACAGGTTCAGAGGCATCCAAGGACATGCTTCCACAGATACGTGTTGCACGGCCACCTGCTGAAGGACGGGGGCGGAACCAGTTGCTTCCACGTTATTGGCCAAGGATTACAGACCAAGAACTGCAACAAATATCTGGAGATTCGAATTCCACCATTGTGCCGTTGTTTGAGAAGGTTCTGAGTGCCAGTGATGCAGGTCGAATTGGTCGCTTAGTTCTACCAAAAGCATGTGCTGAGGCATATTTTCCTCCTATCTCTCAACCAGAAGGTCTTCCATTAAGGATTCAAGATGCGAAGGGGAAAGACTGGGTGTTCCAGTTCAGATTTTGGCCTAATAACAACAGCAGGATGTATGTCTTAGAGGGTGTAACCCCTTGCATACAGTCTATGCAGTTACAAGCTGGCGATACTGTAACATTCAGCCGGATAGATCCCAAAGGAAAACTTGTTATGGGCTTTCGGAAAGCGTCAAGCTCTTTGACTATGCAGGATACCCAAATATCTGCAATTGCTAATGGTGCACTGGCCAACGAAACTTTCTTTTCGGGTGTTATTGAGAACCTACCTATAATCAGTGGTTACTCTGGCCTTCTTCAGTCACTGAAGGGAAGCACAGATCCGCACCTAAATGCTCTGTCTGAGCATTTGAATTTGGCAGATGGGGACATTAGCTGGCGTAAAACTGAGAAACATGGAGGCAGGCCGAACGAGGGCTTGCCGTTGCAGCCATTGCTGGTTTCAGATAAGAAAAGGAGTCGTAACATTGGGTCCAAAAGTAAGAGGTTGCTCATAGATAGTGAAGATGCTCTGGAGCTGAAGCTTACATGGGAAGAGGCACAGGATTTGCTTCGTCCGGCTCCAACTGTCAAGCCTAGCATTGTCATGATTGAGGACCATGAATTTGAAGAATATGAAGAGCCCCCAGTTTTTGGGAAGAAGACTATTTTCACAGCCCGGCCAGCTGGGGGACAGGATCAGTGGGCTCAGTGTGATATTTGTTCCAGATGGCGAAGGTTGCCTGTGGATGTTCTTCTCCCACCAAAGTGGACATGTGCGGACAATGCTTGGGACCCTAAAAGGTGTTCGTGTTCTGCACCGGATGAAATGAACCCAAAGGAGCTGGAAAATCTTCTGAGACTGAATATGGATTTCAAGAAGCGGAGAATCACAGCAAGCCATAAACCAGCCCAAGAACTTGAATCTTCTGGCCTAGACGCTCTGGCTACTGCTGCAGTTCTCGGAGACAATGTGGGCAACTCTGTCACATCGTCTGTTGCGACCACCACCAAACACCCCCGGCATCGCCCTGGCTGCACGTGTATTGTGTGCATCCAGCCCCCTAGCGGGAAGGGCCCCAAGCATAAGCCCACGTGCACATGCAACGTGTGCATGACCGTGAAGCGACGCTTCGAAACCCTCATGATGCGCAAGAAGAAACGTCAGTCAGCGCGTGAGGCAGAGATTGTCCAGAGGAAGCACCTTATATGGGGCCCTAAGGATGAAGTAGAAATAGACAGCACCTCAAGATGCACACTATTGCCTCTAGATCCTTCAGAGAATGAAGCCAGGCAAGCAAACGTGTCAGAGCCCGGTGGTCAGAGCAGGAACCTAACTGAGAAGACTGCCGAGACCAGCAAGGGGCAGATAGACTTGAATTGTCAGCCCGACCGTGAAGAAGATCTGCAAGCGGGTTCGGCTTGCGTTAGCATGATGAGTCTTCTTCAAGTGGCGAGTCTTCCGTTAGAGACGTATCTGAAGCAGAACGGGCTCACAAGCTTGATATGTGAGCAGCAAGCAAGCTCCAGTTCTCATGTGCCGCTTCAGGTTAATGGGGAAAGTGAAGGACGGCCACCTGACGAGGGCCACCTTGCTCCGGTAGTTCAGGAGCGGGAGAGTGGGAGTGATGAAAATCATTGTGGGACTGATCAAGCCCGACATGATCCAGTGTGA 2772 0.4874 MASKVCMNVSCGATSLIEWRKGWGLRSGGFANLCDKCGSAYEQLGFCDTFHLKESGWRECSSCGKRLHCGCIASKSLLELLDNGGVACISCVKSLELSSIPSDEKPKGFSTSAAENVGEMHSTFMDNRIDGVDNEKLMQLGKNMEGNGQNNLLQSQKYGTNGSLGQIKREQVMPYVGEDGSTSFSNLNQAFMGSSQIATLDDIKETAGVKDMYESLAQTCFNITLGAPSGTPNLALPLAGVFVEGREQSKTASPLQQGQRSRHLLPRPLKTGSGTGSEASKDMLPQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGDSNSTIVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDAKGKDWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRIDPKGKLVMGFRKASSSLTMQDTQISAIANGALANETFFSGVIENLPIISGYSGLLQSLKGSTDPHLNALSEHLNLADGDISWRKTEKHGGRPNEGLPLQPLLVSDKKRSRNIGSKSKRLLIDSEDALELKLTWEEAQDLLRPAPTVKPSIVMIEDHEFEEYEEPPVFGKKTIFTARPAGGQDQWAQCDICSRWRRLPVDVLLPPKWTCADNAWDPKRCSCSAPDEMNPKELENLLRLNMDFKKRRITASHKPAQELESSGLDALATAAVLGDNVGNSVTSSVATTTKHPRHRPGCTCIVCIQPPSGKGPKHKPTCTCNVCMTVKRRFETLMMRKKKRQSAREAEIVQRKHLIWGPKDEVEIDSTSRCTLLPLDPSENEARQANVSEPGGQSRNLTEKTAETSKGQIDLNCQPDREEDLQAGSACVSMMSLLQVASLPLETYLKQNGLTSLICEQQASSSSHVPLQVNGESEGRPPDEGHLAPVVQERESGSDENHCGTDQARHDPV* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00882 923 Pfam CW-type Zinc Finger 600 642 IPR011124 GO:0008270
Eupl01g00882 923 Gene3D - 598 654 - -
Eupl01g00882 923 SMART B3_2 330 431 IPR003340 GO:0003677
Eupl01g00882 923 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 875 - -
Eupl01g00882 923 ProSiteProfiles B3 DNA-binding domain profile. 330 431 IPR003340 GO:0003677
Eupl01g00882 923 MobiDBLite consensus disorder prediction 795 822 - -
Eupl01g00882 923 MobiDBLite consensus disorder prediction 786 822 - -
Eupl01g00882 923 Gene3D - 308 434 IPR015300 -
Eupl01g00882 923 Pfam B3 DNA binding domain 330 429 IPR003340 GO:0003677
Eupl01g00882 923 MobiDBLite consensus disorder prediction 889 923 - -
Eupl01g00882 923 CDD B3_DNA 328 429 IPR003340 GO:0003677
Eupl01g00882 923 FunFam B3 domain-containing transcription repressor VAL1 308 435 - -
Eupl01g00882 923 SUPERFAMILY DNA-binding pseudobarrel domain 327 430 IPR015300 -
Eupl01g00882 923 MobiDBLite consensus disorder prediction 247 300 - -
Eupl01g00882 923 ProSiteProfiles Zinc finger CW-type profile. 595 645 IPR011124 GO:0008270
Eupl01g00882 923 MobiDBLite consensus disorder prediction 878 923 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00882 Eupl-Chr1 27408598 27427378 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00882 4 874 B3 DNA Binding Superfamily AT4G32010 49.374 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl01g00882 B3 1.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00882 K09287 - nnu:104593767 1442.94