Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00880 ATGGATTTGGTCCCGGCGCAGAGGATGGAGAACGGACTGAATTCGCAGATGGTTTTCCAGGACGAGAGCTTGCAGTTCAACTGTGGCGCTCCGCCGCAAGGACAGCAACGGCGCGTTGTAGATCCTGGACGGAAAACCAGAGAGGTGAGTAGTTTTGTTGATGAGAAGATTTTTTCCATTGAACGGGAGCGATATTTCCGGGCTCAAGGTGCTGAATTCCGGCGGAATATTTACGATAACTCGCCGGCCCAGCAAGACCGTCAGGGGAACCAGAATTGGAATGGTGAGGAAAGTACGGGCACACCGAGTGGGGATGGATCAGAAGGCGATGAAGAAGAGGAAGATGATGACGAAGAGGATGAAGATGATGAGGTTGACGAAGGAGACGGTGAAATCGAGGGTTTGGTTGCCGTCGATGATGGTAATAAGAATAACAATAGCAGCGGTAGTGTACATAGTGGTTCGGAGAAGATACGCAACGAAAAAGCGAATTTACAGAAACACCATTCTTTTGGATCGAGTAGAGGAGTGTTGGTGAAGGATGGAAATGTTATTCACTCTGTAAATAATATTAGAGGGAGTTCAAGTGAACAACACCACCAACAAGGACGGGCCAGCCACTACGAGAACGCGATTACAATTGCGGAACCTGATATATACTATTCACAGTTTCTACAGGGGCCAGAGGGTTCCGCCCTCGGGCAGAAGGACGTAGGAGGGGAAAATGGGTGTGGGTTTAGTGGGAGAAAGGATGTTTCTTTGTCAATAGAATCAGGGGAGTCTCTGAGGATGATTCTTTCAGATCCTTTGACAGGAACCCTCATGGATGATGCCATGATATTGCCTTGTGGACACTCTTATGGAAGTGGTGGATTGCAGCAGGTTATTAAAATGAAAGTTTGCTACAGTTGTCCACAGACAGTTTTAGAAGACTCAGCGGCACCAAATCTCTCTCTCCGTTCTGCAGTTCAGGCATTTCGTCGGGAAGAGGAGTTACAATCTTATGGGGCATCCAAAAGAAGAAGAGAAAGGTTTGATCAGGACAAGTGTAGTTACCGTGATCCATTTTCCATGGATAAAACTTACAATTCAAGGGGTAAAGGTGTTCAGTTTCCATTTGCTGTCACTGATCGGGTTATAATCAAGGGGAACAAGAGGACACCCCTACGCTTTGTTGGACGCGAGGCTGTTGTAACAACACAGTGCTTGAATGGATGGTATGTGGTAAAGACATTGGACAATGCAGAGAGTGTCAAATTGCAGTATCGTTCTTTAGCCAAGGTTTCTGATAATCCATCCTCAAACATGATGTCTAGTAAGACTACACCAAACTGGCTTTAG 1341 0.4646 MDLVPAQRMENGLNSQMVFQDESLQFNCGAPPQGQQRRVVDPGRKTREVSSFVDEKIFSIERERYFRAQGAEFRRNIYDNSPAQQDRQGNQNWNGEESTGTPSGDGSEGDEEEEDDDEEDEDDEVDEGDGEIEGLVAVDDGNKNNNSSGSVHSGSEKIRNEKANLQKHHSFGSSRGVLVKDGNVIHSVNNIRGSSSEQHHQQGRASHYENAITIAEPDIYYSQFLQGPEGSALGQKDVGGENGCGFSGRKDVSLSIESGESLRMILSDPLTGTLMDDAMILPCGHSYGSGGLQQVIKMKVCYSCPQTVLEDSAAPNLSLRSAVQAFRREEELQSYGASKRRRERFDQDKCSYRDPFSMDKTYNSRGKGVQFPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVSDNPSSNMMSSKTTPNWL* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00880 446 MobiDBLite consensus disorder prediction 140 154 - -
Eupl01g00880 446 SUPERFAMILY RING/U-box 266 332 - -
Eupl01g00880 446 MobiDBLite consensus disorder prediction 106 134 - -
Eupl01g00880 446 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 264 334 IPR013083 -
Eupl01g00880 446 MobiDBLite consensus disorder prediction 78 105 - -
Eupl01g00880 446 ProSiteProfiles U-box domain profile. 261 333 IPR003613 GO:0004842|GO:0016567
Eupl01g00880 446 MobiDBLite consensus disorder prediction 76 156 - -
Eupl01g00880 446 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 444 - -
Eupl01g00880 446 MobiDBLite consensus disorder prediction 27 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00880 Eupl-Chr1 27363354 27382822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00880 220 446 Plant U-box Gene Family AT5G05230 59.307 1.26e-86 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00880 - - nnu:104593764 602.438