Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00877 ATGAGAAGGCTACTCAGTCTCATTGCCTTTCTCCTTTTGCTTCCGGCTTTTGTCAGATCTTTGGCTCCGAGTCTCAACGATGACGTTCTTGGGTTGATTGTCTTCAAGGCCGACCTCCAAGATCCAGACTTGAAGCTGAAATCGTGGAATGCAGATGATGATAGTCCCTGTAATTGGGCTGGAGTGAAATGCAACCCTAGAACCAACCGGGTCTCGGAGCTCGTCCTTGATGGGTTCTCTCTCTCCGGGCGGATAGGCCGAGGCGTCCTCCAACTCCAATTCCTCCGCAGATTGTCACTCTCAAAGAACAATTTCACAGGGGGTATAAATCCTAATCTTGCCCGCCTTGAGAACCTACGAGTTATTGACTTAAGTGAGAACAGTTTCTCTGGATCAATTCCGGATGAACTTTTTAGACAATGTGGGTCTTTAAGAGAAGTTTCGTTTGCCAGGAACAACCTCTCAGGGCAAATACCACAGAGTTTGAACTTGTGCTCGACACTCACAGATGTTAACATCTCCTCAAATCAACTCTCTGGTCATTTACCCTCTGAAATCTGGTCTTTGAATGGCCTTCGATCGCTTGATCTTTCAGATAATTTGCTGGAGGGGGAGATTCTGAAAGGGATTAAAGGTTTATATAATTTGAGATCAATTAATTTACGAAAAAACCGGTTCACTGGGCAGTTGCCGGATGACATTGGAGGTTGTTTGCTTTTGAAAGTGCTTGATTTCAGCGATAATTCTCTATCTGGAGGCCTACCAGATTCAATGCAGAAACTTACTATGTGCAGTTCCCTAAGTTTACAAGGGAATTTGCTTGTCGGAGAAGTTCCAGCATGGATGGGAGAAATGAGGAGCCTTATAACTTTGGATCTTTCCAGGAACGGATTTTCTGGCCAGATTCCAGATTCAATGGGAAATCTTCAGTCACTGAAGATACTGAATGTATCCGAGAACAAGTTTACTGGGGTCTTTCCAAAGTCATTGATCAATTGCAGAAGCCTTTCGGCCATGGATTTTAGCCGGAACTTGTTGACGGGTAATCTTCCAGCGTGGATCTTCGGGCTGGGCTTACAGAGAGTTTCGCTTTCAGAGAACAGACTAAGTGGAATAATAGAAAATCCTTCTTCCCCATCAATGGAGGCCTCATATCAGAAGCTTCAAGTCTTAGACTTATCTGACAACACGTTTTCGGGTGAAATTCCATCCGACATTGGGGTTTTTAGCAGCTTGCAGATCTTGAATATGTCCAGGAACTCACTCGTTGGAGCTATTCCTGCCAGTGTAGGTGAATTGAAGGCTGTAGATGTTCTTGATTTTAGCGAGAACCGACTAAAAGGGAGCATCCCTTTTGAAATCGGAGGAGCAGTTTCTTTGAAGGAGCTGAGGTTGGAAAAGAATTTGCTAGAAGGGAAAATTCCGACCCAGATTGAGAAGTGTTCATCTCTAACATCTCTGATCCTGTCGCAGAATAAACTCACAGGCCCTATACCCCCAAATATAGCAAACCTCACCAACCTACAAATTGTAGACTTATCTTTAAACAACCTCACTGGAAGCCTACCCAAGCAGCTCGCAAATCTCCCTCACCTCCTCTCCTTCAATGTCTCCCACAACGACCTCCAAGGTGAGCTACCTGCTGGCAGCTTCTTCAATACCATCTCCCCTTCCTCTGTTTCGGGTAATCCGTCCCTCTGTGGCTCTGCAGTAAACAGCTCTTGTCCTACCGTCCTTCCCAAGCCCATTGTCCTCAACCCTAACTCTTCTTCTGACTCTGGTGCTGGCTCCTTCTCACCGAACATCCGCCACAAGAAGATCATTCTCAGCATCTCTGCCCTAATTGCCATTGGTGCAGCTGTAGTCATTGCCCTCGGTGTGGTTGCCGTCACTGTCCTCAACCTACGTGTACGGTCCTCTACCCCCCATTCTGCTGCAGCCCTCGAATTATCAGGTGGTGATGACTACAGCTGTTCCCCCACCAATGGCGCTAACTCTGGCAAGCTTGTAATGTTCTCTGGTGACCCTGAATTCAGTGCTGGGGCCCATGCACTGCTCAACAAGGACTGTGAGCTTGGGCGTGGTGGGTTCGGAGCTGTCTACCGAACAGTCCTCCGAGATGGACGTCCAGTTGCGATCAAGAAGCTCACTGTGTCAAGCCTGGTCAAATCCCAAGAAGATTTCGAGAGGGAAGTTAAGAAGCTTGGAAAGATTCGGCACCATAATCTCGTGGAGCTTGAAGGGTACTATTGGACTCCATCGTTGCAGCTCCTCATTTATGAATTTGTCTCCGGGGGGAGTTTGTATAAACAGCTCCATGAGGGACCAGGCGGAAACGTTCTCTCGTGGCATGAGAGGTTTAACATAATTCTTGGGACAGCAAAAAGCTTGGCCCATTTGCACCAAATGAACATAATCCACTACAATCTGAAGTCAAGCAATGTCTTGATTGACAGCTCCGGTGAGCCAAAGGTTGGAGATTTTGGCTTAGCAAGACTGCTGCCTATGCTAGACCGTTACATTCTTAGCAGCAAAATACAAAGTGCACTTGGGTACATGGCCCCCGAGTTTGCCTGCCGGACGGTGAAAATAACTGAGAAGTGTGATGTGTACGGTTTTGGTGTCTTGGTTCTGGAGGTTGTCACAGGGAAACGACCAGTGGAGTATATGGAGGATGATGTTGTGGTGCTTTGTGACATGGTGAGAGGGGCATTGGAGGAAGGGAGGGTTGAAGAGTGTGTGGACACAAGGCTTCAGGGTAAGTTCCCGGCAGAGGAGGCAATTCCAGTGATGAAGTTGGGTTTGATATGTACATCTCACGTCCCCTCAAACCGGCCAGACATGGGAGAGGTCGTTAATATATTGGAACTGATCAGATGCCCGTCAGAAGACCAAGAGGAGTTGGTATGA 2910 0.4729 MRRLLSLIAFLLLLPAFVRSLAPSLNDDVLGLIVFKADLQDPDLKLKSWNADDDSPCNWAGVKCNPRTNRVSELVLDGFSLSGRIGRGVLQLQFLRRLSLSKNNFTGGINPNLARLENLRVIDLSENSFSGSIPDELFRQCGSLREVSFARNNLSGQIPQSLNLCSTLTDVNISSNQLSGHLPSEIWSLNGLRSLDLSDNLLEGEILKGIKGLYNLRSINLRKNRFTGQLPDDIGGCLLLKVLDFSDNSLSGGLPDSMQKLTMCSSLSLQGNLLVGEVPAWMGEMRSLITLDLSRNGFSGQIPDSMGNLQSLKILNVSENKFTGVFPKSLINCRSLSAMDFSRNLLTGNLPAWIFGLGLQRVSLSENRLSGIIENPSSPSMEASYQKLQVLDLSDNTFSGEIPSDIGVFSSLQILNMSRNSLVGAIPASVGELKAVDVLDFSENRLKGSIPFEIGGAVSLKELRLEKNLLEGKIPTQIEKCSSLTSLILSQNKLTGPIPPNIANLTNLQIVDLSLNNLTGSLPKQLANLPHLLSFNVSHNDLQGELPAGSFFNTISPSSVSGNPSLCGSAVNSSCPTVLPKPIVLNPNSSSDSGAGSFSPNIRHKKIILSISALIAIGAAVVIALGVVAVTVLNLRVRSSTPHSAAALELSGGDDYSCSPTNGANSGKLVMFSGDPEFSAGAHALLNKDCELGRGGFGAVYRTVLRDGRPVAIKKLTVSSLVKSQEDFEREVKKLGKIRHHNLVELEGYYWTPSLQLLIYEFVSGGSLYKQLHEGPGGNVLSWHERFNIILGTAKSLAHLHQMNIIHYNLKSSNVLIDSSGEPKVGDFGLARLLPMLDRYILSSKIQSALGYMAPEFACRTVKITEKCDVYGFGVLVLEVVTGKRPVEYMEDDVVVLCDMVRGALEEGRVEECVDTRLQGKFPAEEAIPVMKLGLICTSHVPSNRPDMGEVVNILELIRCPSEDQEELV* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00877 969 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 305 579 - -
Eupl01g00877 969 Gene3D Ribonuclease Inhibitor 25 177 IPR032675 -
Eupl01g00877 969 SUPERFAMILY L domain-like 279 559 - -
Eupl01g00877 969 Pfam Leucine rich repeat N-terminal domain 26 65 IPR013210 -
Eupl01g00877 969 Pfam Protein tyrosine and serine/threonine kinase 688 954 IPR001245 GO:0004672|GO:0006468
Eupl01g00877 969 Gene3D Transferase(Phosphotransferase) domain 1 763 967 - -
Eupl01g00877 969 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 763 964 - -
Eupl01g00877 969 SUPERFAMILY Protein kinase-like (PK-like) 689 959 IPR011009 -
Eupl01g00877 969 FunFam probable LRR receptor-like serine/threonine-protein kinase IRK 680 762 - -
Eupl01g00877 969 SMART LRR_typ_2 285 309 IPR003591 -
Eupl01g00877 969 SMART LRR_typ_2 529 553 IPR003591 -
Eupl01g00877 969 SMART LRR_typ_2 409 433 IPR003591 -
Eupl01g00877 969 SMART LRR_typ_2 213 237 IPR003591 -
Eupl01g00877 969 SMART LRR_typ_2 116 140 IPR003591 -
Eupl01g00877 969 SMART LRR_typ_2 505 528 IPR003591 -
Eupl01g00877 969 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 315 956 - -
Eupl01g00877 969 Gene3D Ribonuclease Inhibitor 178 282 IPR032675 -
Eupl01g00877 969 ProSiteProfiles Protein kinase domain profile. 686 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00877 969 CDD STKc_IRAK 692 958 - -
Eupl01g00877 969 SUPERFAMILY L domain-like 44 374 - -
Eupl01g00877 969 Gene3D Ribonuclease Inhibitor 290 578 IPR032675 -
Eupl01g00877 969 Pfam Leucine Rich Repeat 240 261 IPR001611 GO:0005515
Eupl01g00877 969 FunFam Putative LRR receptor-like serine/threonine-protein kinase IRK 26 304 - -
Eupl01g00877 969 ProSitePatterns Protein kinases ATP-binding region signature. 692 715 IPR017441 GO:0005524
Eupl01g00877 969 Gene3D Phosphorylase Kinase; domain 1 680 762 - -
Eupl01g00877 969 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Eupl01g00877 969 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00877 Eupl-Chr1 27336895 27341860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00877 1 968 Receptor kinase-like Gene Family AT3G56370 67.695 0.0 1264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Eupl01g00877 PK_Tyr_Ser-Thr 3.5e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00877 - - nnu:104594482 1534.24