Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00868 ATGGAGTCTCCTTGGCCGGAAAATATATGGATTGATCGGAAAAAGGCTTCGGAAAATCTAATTCAAGGCCGTGATTCTGTAAACCAACTTCAAATTCTCCTCCAAAAGTCTCATGGAGATGGTTGGTTGGTTTCCGCCGAAGACCTCGCCGAGAAAATTCGGCAATCGATCGACGGCGCTCTTTCGATACTAAATTCCGGTGAGATCGGAGGAATTCGTCAAAGTCCGGCGATTACCGGGGTTAGTTCACCTTGTTCCGATGACCGGAAAACTGAAGATTCCGGCGAGAGCAGGAAGTTTCCGGCTTCAAAGGATCAAAGAGGAGGCTATAAGAGGAGAAAGACTTCACAGACATGGACAAGGCTCACTCCAACCCCTATCGACGACGGCTATGCGTGGCGAAAATACGGGCAGAAAGAGATCCTCAATGCCAAATTTCCGAGGAGCTACTTCAGGTGCACACACAGGAATGATCAAGGATGTGACGCAACCAAACAAGTTCAGAGAACGGAAGACGAATCGTCCATGTACCGGACCACATACATGGGGCATCATACATGCAGAGATACACTAAAGGCTCCTCAGTTCGTCTTGGATTCTAGTCCTAGAAATCCTTATGTTCTTGACTTTCAATCAAGTAAACAAGAGTCGTTCACCCCCTTCTCATCATTCCAATCAATGAATCAGAAATGTAAAGAAGAGATACCATGCGATCTGACCTACCACGACCAATCGTCCTCTGAATATCTCTTTTTGCCGGATCTAACGACATTCGATTCATCTGGGCCCACAATGTTGGCTTTGACACCCGGGTCAGATACGACGAGTTCTCAAAGTCTGGAGGTGGGTTTGATGGTGGAGTCTGTTGATTTTGACGATGTGTTCCATTTTGATGAGGAGGTGTTCTTCAACTAG 915 0.4667 MESPWPENIWIDRKKASENLIQGRDSVNQLQILLQKSHGDGWLVSAEDLAEKIRQSIDGALSILNSGEIGGIRQSPAITGVSSPCSDDRKTEDSGESRKFPASKDQRGGYKRRKTSQTWTRLTPTPIDDGYAWRKYGQKEILNAKFPRSYFRCTHRNDQGCDATKQVQRTEDESSMYRTTYMGHHTCRDTLKAPQFVLDSSPRNPYVLDFQSSKQESFTPFSSFQSMNQKCKEEIPCDLTYHDQSSSEYLFLPDLTTFDSSGPTMLALTPGSDTTSSQSLEVGLMVESVDFDDVFHFDEEVFFN* 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00868 304 Pfam WRKY DNA -binding domain 128 188 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00868 304 SUPERFAMILY WRKY DNA-binding domain 119 188 IPR036576 GO:0003700|GO:0006355|GO:0043565
Eupl01g00868 304 MobiDBLite consensus disorder prediction 86 112 - -
Eupl01g00868 304 ProSiteProfiles WRKY domain profile. 127 185 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00868 304 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 23 211 IPR044810 GO:0003700
Eupl01g00868 304 SMART WRKY_cls 127 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Eupl01g00868 304 MobiDBLite consensus disorder prediction 73 117 - -
Eupl01g00868 304 Gene3D WRKY domain 106 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00868 Eupl-Chr1 27201946 27204256 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00868 15 195 WRKY Transcription Factor Family AT3G56400 46.739 2.99e-45 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Eupl01g00868 WRKY 3.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00868 - - nnu:104593755 290.812