Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00867 ATGACTTCTGGCCAGCCGTTGCTGTCATCATCTTTATCTTGTGATTCAGATCCTTCATCTGTGGTGCCTCCTCCGGGGCCTGTGAATATTGGCTCCTTTAGCTGCCTCTGTCTGAATGCTTCCTTTTCCTCTTCAAATTTTGACGATGCTACAAGCCGTTCCTTTGATGTGAAGGACGAGGACGCTGTCTCTGTTGCAGATACAAATTGTTGTCTGGGCCCCCTTGAACACTCTGATTCTCTCACGACCACCAACCGGTTTAATTCGGCTGGGTCCCAGTTCTTTCAACAGTTTCTGTTGGAATGCCCCATGCAAGAAGGACGGCAGCTTGTATCCTGGGGTACTATGGAGCTGCAGGGCAATTTAACAACTTCTGAAGTTTCTGGGACTTCTCTGGTGCAGGAAAAGTTGAACAGATCTCAGCGGATTCGCCACAAAAGTGTGCAATTTGAAGATAATTTGTCATCGGAAGAGAATCCTAGATTAATTTATATCAACGATCCGAGGAGAACGAATGCCAAGTACGAGTTCACAGGGAATGAGATCCGAACCAGCAAGTACACGGTTATCACTTTCTTGCCAAAAAATCTGTTCATCCAATTCCAACGAGTTGCTTATTTGTATTTCCTAGCTATTGCTGCTCTGAACCAGCTTCCCCCTCTTGCTGTTTTTGGAAGAACAGTGTCTCTTTTCCCTCTCCTCTTTGTGCTTTGTGTCACAGCTATTAAAGATGGCTATGAAGATTGGCGAAGGCACAGATCAGATAGGAATGAGAACAATCGAGAGGCCCTAGTGCTCCAATTTGGTCAGTTCCAACCGAAGAAATGGAAAAAGATACGAGCTGGTGAGGTTGTGAGAATCTGTGCCGATGAGACAATTCCATGTGACATGGTTTTGTTAGGGACAAGCAATCCTAGTGGAATAGCATACATTCAGACAATGAACCTGGATGGTGAGTCAAACTTGAAGACAAGGTACGTTCGGCAGGAAACAGCTTCAACAATTTTTGATGGGGGGAGCATTTCAGGGCTTATCAGATGTGAGCAGCCTAATAGAAATATTTATGAGTTCACAGCCAACATGGAATTCAATGGGCAGAGATTTCCCCTTAGCCAATTGAACATCATTTTGCGCGGTTGCCAGCTGAAGAACACAGAGTGGGTAATCGGTGGTGTTGTGTATGCTGGACAGGAAACGAAAGCAATGTTGAATAGTGCAGCTTCTCCTTCCAAAAGAAGCAAACTAGAAACCTATATGAACAGGGAAACCTTGTGGCTGTCGGTTTGTCTTCTTGTCATGTGTGTGATTGTTGCACTTGGGATGGGCTTGTGGCTAGAACGCCACAAGGATATGCTTGATACTTTGCCTTATTACAGAAAAAGATACTTCACAAAGGGGTGGAATAATGGGAAAACCTACAAATACTATGGGATTATCATGGAGATATTTTTCTCATTTTTGAGTTCCATTATAGTGTTTCAGATAATGATACCGATATCTTTGTATATTACAATGGAGTTGGTCCGGTTGGGACAATCGTACTTCATGATTGAAGATGAGCAGATGTATGACAGTAGTTCTGACTCAAGGTTTCAGTGCAGATCGTTAAATATAAATGAAGACCTAGGTCAGATACGGTATGTATTCTCAGATAAGACAGGGACACTGACTGAGAACAAAATGGAGTTCCGGAGAGCCAGTGTGTATGGGAAGAATTATGGGTACTCCTTGAATATCACTGATCATCCATTGCAAGAAGCAAGCATTGCAGCAGAAGTAACAGAAGGAAAAAGATGGAAGCTTAAATCTGAAATAACTGTTGATACTGAACTTGTGGCATTGTTGCATAAAGACTTGTCTGGAGATGAAAGGGTAGCTGTGCATGAGTTTTTCCTTACATTGGCAGCTTGTAACACTGTGATCCCAATCCTTACCCGAGATTCATCTTCTAGTAATACGGTGAGTGAATTACATGAAGATGTAGAAGCTATTGACTATCAGGGTGAATCTCCTGATGAGCAAGCATTAGTCGCTGCAGCTTCTGCTTATGGATACACTCTTATTGAGCGCACATCCGGGCACATTGTGATTGATGTCAATGGTGAGAAACTAAGGTTGGATGTATTGGGCCTGCATGAGTTTGATAGTGTGCGGAAAAGAATGTCAGTGGTTATTAGATTTCCTAACAATGCTGTAAAGGTTCTGGTAAAAGGTGCTGATACTTCAATGTTCAGTATTTTAGCAAAAGAGACTGAAAAGTCTGACAACAGAGAGCCTCTGTCAATTAATACGAGACATAAAACACAGAATCATTTGACTGAATATTCTTCACAAGGTTTACGCACACTTGTCGTTGCTTCAAGGGATCTTACAGATGCAGAACTTGAGGAGTGGCAATGTAGTTATGAAGAGGCAAGCACTTCATTGTCTGAGAGATCGACAAAGTTACGCCAGACGGCAGCTCTTATAGAATGTAATTTAAATCTTCTTGGGGCTACTGGAGTCGAAGACAAACTACAAGATGGTGTGCCCGAGGCCATCGAGTCCCTTCGGCAAGCAGGAATCAAGGTCTGGGTTTTAACTGGAGATAAACAAGAGACTGCAATTTCAATTGGTCTCTCAAGCAAACTCCTGACCCCAGATATGCAGCAGATTGTTATAAATGGCAATTCAGAGGATGAATGCAGGAATCTTTTGGTTGATGCAAAGGCCAAATTTGGTGTCAAATCAGCAGATAGCAGGAATAAGAGTTTGAAACAGAAAAAGAATGATTATCTTGATTGTCTTGAGATTCTTGATGAGCCAAGGACTTCCAATGTGTTACAATGGCATGCGAGGAAACTGGCAGATGTGAAAAATACTTCACTAGCACTCATAATTGATGGGAACAGTCTCGTGTACATATTGGAGAAGGATCTGGACTCAGAGCTTTTCGATCTGGCAACTTCCTGTAGAGTTGTGATTTGCTGTCGTGTTGCTCCTTTGCAAAAAGCTGGGATTGTTGATCTAATTAAGAGTCGGTCAGATGACATGACACTGGCTATAGGTGATGGGGCTAATGATGTTTCAATGATCCAAATGGCGGATGTTGGCATTGGGATATGTGGTCAGGAAGGACGTCAAGCGGTGATGGCGTCGGATTTTGCCATGGGCCAGTTCCGGTTTCTGAAAAGATTACTCCTTGTGCATGGACACTGGAATTATCAGCGTGTTGGTTACTTAGTTTTGTACAACTTCTACCGTAACGCTGTATTTGTATTGATGCTGTTCTGGTATATATTATGCACAGCTTTTTCTACGACTTCTGCATTAACAGATTTGAGTAGTATGTTCTATTCTATTATCTATACTTCAATCCCTACGATAGTTGTGGGTATTCTGGACAAGGACTTAAGTCATAAGACACTTCTCCAGTATCCAAAGCTTTATGGGGCAGGGCATAGACAGGAGAGTTATAATATGCACCTCTTCTGGATCACAATGATCGACACTCTGTGGCAAAGTCTTGTTCTCTTTTATGTACCTCTCTTTACCTACAAGGAGAGTTCAATTGACATCTGGAGCATAGGCAGTATGTGGACAATTGCTGTTGTTGTACTAGTGAATATTCACTTAGCAATGGACATTCAACGTTGGGTATTGATTACTCATGTTGCATTATGGGGATCTATTATCGTTACATATGTTTGCATGGTGATATTGGACTCCATTCCCATCTTTCCAAATTACTGGACAATTTACCATCTGGCGAAGTTGGCTACCTACTGGCTCACCATTTTACTTATAACAATCTTAGCATTGCTCCCACGTTTTCTTTTTAAAGTTATACATCAGATTTTTTGGCCTTCCGATATTCAGATTGCTAGAGAAGCTGAAATACTGAGGAAACAGCTTCACCATTTGCAATCAAAACCAGATCAAGATGAGTTTCGTGACTGCAAGCACGCGACAGGGAATTGTCATTTGGTGAAAGAGAGATGGGAACAACCAAGTGAAGAATAA 4002 0.421 MTSGQPLLSSSLSCDSDPSSVVPPPGPVNIGSFSCLCLNASFSSSNFDDATSRSFDVKDEDAVSVADTNCCLGPLEHSDSLTTTNRFNSAGSQFFQQFLLECPMQEGRQLVSWGTMELQGNLTTSEVSGTSLVQEKLNRSQRIRHKSVQFEDNLSSEENPRLIYINDPRRTNAKYEFTGNEIRTSKYTVITFLPKNLFIQFQRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNREALVLQFGQFQPKKWKKIRAGEVVRICADETIPCDMVLLGTSNPSGIAYIQTMNLDGESNLKTRYVRQETASTIFDGGSISGLIRCEQPNRNIYEFTANMEFNGQRFPLSQLNIILRGCQLKNTEWVIGGVVYAGQETKAMLNSAASPSKRSKLETYMNRETLWLSVCLLVMCVIVALGMGLWLERHKDMLDTLPYYRKRYFTKGWNNGKTYKYYGIIMEIFFSFLSSIIVFQIMIPISLYITMELVRLGQSYFMIEDEQMYDSSSDSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKNYGYSLNITDHPLQEASIAAEVTEGKRWKLKSEITVDTELVALLHKDLSGDERVAVHEFFLTLAACNTVIPILTRDSSSSNTVSELHEDVEAIDYQGESPDEQALVAAASAYGYTLIERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPNNAVKVLVKGADTSMFSILAKETEKSDNREPLSINTRHKTQNHLTEYSSQGLRTLVVASRDLTDAELEEWQCSYEEASTSLSERSTKLRQTAALIECNLNLLGATGVEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSSKLLTPDMQQIVINGNSEDECRNLLVDAKAKFGVKSADSRNKSLKQKKNDYLDCLEILDEPRTSNVLQWHARKLADVKNTSLALIIDGNSLVYILEKDLDSELFDLATSCRVVICCRVAPLQKAGIVDLIKSRSDDMTLAIGDGANDVSMIQMADVGIGICGQEGRQAVMASDFAMGQFRFLKRLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDLSSMFYSIIYTSIPTIVVGILDKDLSHKTLLQYPKLYGAGHRQESYNMHLFWITMIDTLWQSLVLFYVPLFTYKESSIDIWSIGSMWTIAVVVLVNIHLAMDIQRWVLITHVALWGSIIVTYVCMVILDSIPIFPNYWTIYHLAKLATYWLTILLITILALLPRFLFKVIHQIFWPSDIQIAREAEILRKQLHHLQSKPDQDEFRDCKHATGNCHLVKERWEQPSEE* 1334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00867 1333 Gene3D - 827 1055 IPR023214 -
Eupl01g00867 1333 Pfam Phospholipid-translocating P-type ATPase C-terminal 1043 1283 IPR032630 -
Eupl01g00867 1333 Gene3D - 658 808 IPR023299 GO:0000166
Eupl01g00867 1333 SUPERFAMILY Calcium ATPase, transduction domain A 260 401 IPR008250 -
Eupl01g00867 1333 NCBIfam HAD-IC family P-type ATPase 480 571 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00867 1333 NCBIfam HAD-IC family P-type ATPase 985 1101 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00867 1333 SFLD p-type atpase 533 1066 IPR044492 -
Eupl01g00867 1333 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 144 1296 - -
Eupl01g00867 1333 MobiDBLite consensus disorder prediction 1 21 - -
Eupl01g00867 1333 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 555 843 IPR023299 GO:0000166
Eupl01g00867 1333 Pfam E1-E2 ATPase 260 507 - -
Eupl01g00867 1333 ProSitePatterns E1-E2 ATPases phosphorylation site. 551 557 IPR018303 -
Eupl01g00867 1333 Pfam haloacid dehalogenase-like hydrolase 545 870 - -
Eupl01g00867 1333 NCBIfam phospholipid-translocating P-type ATPase 177 1290 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Eupl01g00867 1333 SUPERFAMILY HAD-like 544 1061 IPR036412 -
Eupl01g00867 1333 FunFam Phospholipid-transporting ATPase 666 817 - -
Eupl01g00867 1333 MobiDBLite consensus disorder prediction 1 18 - -
Eupl01g00867 1333 CDD P-type_ATPase_APLT_Dnf-like 179 1175 - -
Eupl01g00867 1333 SUPERFAMILY Calcium ATPase, transmembrane domain M 176 1282 IPR023298 -
Eupl01g00867 1333 Gene3D - 239 404 - -
Eupl01g00867 1333 SFLD Haloacid Dehalogenase 533 1066 - -
Eupl01g00867 1333 PRINTS P-type cation-transporting ATPase superfamily signature 927 938 - -
Eupl01g00867 1333 PRINTS P-type cation-transporting ATPase superfamily signature 549 563 - -
Eupl01g00867 1333 PRINTS P-type cation-transporting ATPase superfamily signature 1015 1034 - -
Eupl01g00867 1333 Pfam Phospholipid-translocating ATPase N-terminal 163 228 IPR032631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00867 Eupl-Chr1 27168121 27181724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00867 140 1294 Primary Pumps ATPases AT5G04930 57.008 0.0 1340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00867 K14802 - msin:131223868 2051.17