Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00846 ATGGTTACCACTCAAATACCTAGTTTGACTGGGGCCCGTATGTGTAAGTCCTTCCAGAGCCAGTTGCTTCTTCCTGTGGTGGGCCCTGATGTTGTTCCCTCGGAACACATTGAGTTTGATTTTTCTGATGTATTCGGTACTGCTCCAGTTCAAGCCTCAATTGAAGTGAATTCTGAAAATTCTGTACCTGCATCAGATGCGATTGAATTACTTTATGATGATCCAGTGGTAATTTATAGCCGATCACATTCTTTGTTGGGGCCCACGACTTATGTTAGTCAATCATTGAAGCTCAGCAAACTCACATTACATGAAATAGAGGATTCATTGGACCTTGTAGAGTGTATCAATGGAGAGATACTGGAAGAACCTGCTGTTGATGATGATGTTATAGAGATACCTCTCAACCATGTTGACCATGACTCCATGAACAGCCAGGGTTTAGGACTAGATGATTTTGAATTTATGAAGGTTGTTGGGCAAGGTGCATTTGGAAAAGTGTTTCAAGTGAGGAAGAGGGGTACTTCTGAAATATATGCAATGAAAGTCATCCGTAAGGATAAGATTATGGAGAAGAATCATGCAGGATACATGAAAGCTGAGAGGGATATTCTAACTAAACTAGATCACCCTTTCATCGTGCAGCTCCTATACTCTTTCCAGACTAAGTATAGACTGTACCTTGTGCTGGATTTTGTAAACGGAGGTCACCTATTTTTTCAGCTCTACCGCCATGGTCTTTTCAGAGAGGATCTTGCACGCATATATACTGCGGAGATTGTTTCAGCTGTTTCTCACCTCCATGCAAATGGCATAATGCATAGGGACCTCAAGCCAGAAAATATCCTTCTGGATGCAGATGGTCATGTCGTGTTGACTGATTTTGGCCTGGCAAAGCAATTTGAAGAGAATACAAGATCCAACTCCATGTGTGGAACACTAGAATATATGTCGCCTGAAATTGTTCTTGGTAAGGGACATGATAAGGCTGCAGACTGGTGGAGTGTTGGAATCTTATTGTTCGAGATGCTCACTGGGAGGCCACCTTTTTTTGGCAACCGAGAGAAAATTCAGCAGAAGATAATAAAGGATAAGATCAAGCTGCCTGCATTTTTGACAAGCGAAGCACATTCCTTGTTGAAAGCGCTGCTGCAGAAGGAACCAAGCAAGCGCCTTGGCAGTGGACCAGGTGGGAGCGAGGAGATAAAGCGCCACAAGTGGTTCAAGCCAGTAAACTGGAAGAAATTGGAGGCCCGGGAGATCCAGCCAAGCTTCCGACCCGAAGTTGCTGGGAAAAACTGCATCGCCAACTTTGAGGAGTGCTGGACCAACATGCCACTGTTAGATTCTCCGGCTGCCAGCCCAACAGCCAGTGACATAAACTTCAAAGGTTTCACTTACGTGAAGCCTGCTGCCTCTTTTCTTCGAAGGAATGACTCATTCTACTAG 1449 0.4431 MVTTQIPSLTGARMCKSFQSQLLLPVVGPDVVPSEHIEFDFSDVFGTAPVQASIEVNSENSVPASDAIELLYDDPVVIYSRSHSLLGPTTYVSQSLKLSKLTLHEIEDSLDLVECINGEILEEPAVDDDVIEIPLNHVDHDSMNSQGLGLDDFEFMKVVGQGAFGKVFQVRKRGTSEIYAMKVIRKDKIMEKNHAGYMKAERDILTKLDHPFIVQLLYSFQTKYRLYLVLDFVNGGHLFFQLYRHGLFREDLARIYTAEIVSAVSHLHANGIMHRDLKPENILLDADGHVVLTDFGLAKQFEENTRSNSMCGTLEYMSPEIVLGKGHDKAADWWSVGILLFEMLTGRPPFFGNREKIQQKIIKDKIKLPAFLTSEAHSLLKALLQKEPSKRLGSGPGGSEEIKRHKWFKPVNWKKLEAREIQPSFRPEVAGKNCIANFEECWTNMPLLDSPAASPTASDINFKGFTYVKPAASFLRRNDSFY* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00846 482 ProSiteProfiles Protein kinase domain profile. 153 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00846 482 SMART pkinase_C_6 409 469 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl01g00846 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Eupl01g00846 482 Gene3D Transferase(Phosphotransferase) domain 1 233 427 - -
Eupl01g00846 482 ProSitePatterns Protein kinases ATP-binding region signature. 159 186 IPR017441 GO:0005524
Eupl01g00846 482 Gene3D Phosphorylase Kinase; domain 1 150 450 - -
Eupl01g00846 482 FunFam Non-specific serine/threonine protein kinase 150 253 - -
Eupl01g00846 482 ProSiteProfiles AGC-kinase C-terminal domain profile. 409 477 IPR000961 GO:0004674|GO:0005524|GO:0006468
Eupl01g00846 482 PANTHER RIBOSOMAL PROTEIN S6 KINASE 136 471 - -
Eupl01g00846 482 FunFam Non-specific serine/threonine protein kinase 233 427 - -
Eupl01g00846 482 SMART serkin_6 153 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00846 482 SUPERFAMILY Protein kinase-like (PK-like) 150 462 IPR011009 -
Eupl01g00846 482 Pfam Protein kinase domain 153 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00846 482 CDD STKc_AGC 159 408 IPR045270 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00846 Eupl-Chr1 26968752 26974150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00846 1 480 AGC Kinase Gene Family AT3G08720 66.872 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC-Pl Eupl01g00846 Pkinase 1.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00846 K04688 - nnu:104593748 744.962