Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00845 ATGGCTTCTCTGCTTTCCCCGACTGCAACGTCCCTGCAACAGAACCCGAAGTTCCCATGGCTTTCTCCTTCAAAGCCCATCTCCCAGAATCACCTCTCCTCATTTACAAACCCTTCTACAAGAAAGCCAGGGAGCTGCAATGCATTTTTCGGAAACATTTCAGAAGATTTGTTGAAAAATACTCTTCATCTTAGCGAATCATCGGCTCTGTTCCCATTCTTACAATCTGGGTATTCGCAATTCCAGAGTGTTGCTGACGAATTACCAGAAATGGAGAGATGGGGGATTCTGGTTTTTGTTGGGCTTGGTTGGATTTACTTAACTGCGAGGCCGGGTGTTCTTATGGGTGCCATTGATGCTTACCTTCTAGCCCCTTTGCAGCTTGGTTTTGACAGCTTGTTGGGTCGGAGGAGCTTGAAGAGGACTGATTTTGTGGTTGGGGATAGATTGGGGGAAGGGTCTTTTGGGGTTGTTTATTCGGGTGCAATTGTTCCGAAGAATGTGAGTGTGGAAGATCGAGTACAGAAGAGAGGAAGAGCACTGGAGATCGATGGGAGGTTCAAGGAAAAGGTCATTCTGAAAAAGGTAAAGGTTGGAATTCAAGGGGCTGAGGAATGTGGCGATTTTGAGGAGTGGTTTAACTACAGGCTATCCAGAGCGGCTCCTGAAACATGTGCTGAGTTCCTTGGAAGTTTTGTTGCGGACAAAACAAACTCACAATTCACTAAGGGTGGCAAATGGCTTGTATGGAAATTTGAGCCCATGTCCCAGGGAGATCGAGACCTGGCCGATTACTTGAAAGACCGCAACTTCCCTTTGAACTTAGAGTCCATTATGTTTGGACGCATCTTACAAGGACTAGACTCTATTGAGCGGAATGCATTGATCATCAAACAAATAATGCGTCAGATTATAACTTCGCTCAAGAAGATCCATGACACGGGTATTGTTCACCGAGACGTTAAACCAGCCAATTTGGTGGTGACAAGGAAGGGACAGATCAAGCTCATAGATTTCGGGGCAGCCACAGACCTTCGGATTGGCAAGAACTTTGTACCCAACCGTGGCCTGCTCGATCCAGACTATTGTCCTCCTGAACTGTACGTGCTCCCAGAAGAAACGCCCACGCCTCCCCCAGAGCCCGTAGCAGCTTTACTTTCTCCTATTCTATGGCAGCTTAACAGTCCTGATCTGTTTGATATGTACTCTGCTGGGATTACATTCTTGCAAATGGCTATTCCCACCTTAAGGTCGACAGCAGGTTTAAAGAATTTCAATTCAGAAATAAAGACAGTTGGATATGACTTAAAGAAATGGAAGGAAGTCACCCGATTGAGGCCTGACCTGCGGATTCTCAATCTTGACTCTGGTAGAGGGTGGGACCTGGCCACAAGGCTAATTTCTGAGAGAGGATTCCTTAGAAGAGGGAGGTTATCAGCTGCTGCAGCACTAAGGCATCCATATTTCTTGTTGGGTGGTGACCAAGCAGCTGCAGTTCTTTCAAAACTAAGCTTAAGCAAGTATAACAGAAGAAAAAAGTAA 1542 0.4611 MASLLSPTATSLQQNPKFPWLSPSKPISQNHLSSFTNPSTRKPGSCNAFFGNISEDLLKNTLHLSESSALFPFLQSGYSQFQSVADELPEMERWGILVFVGLGWIYLTARPGVLMGAIDAYLLAPLQLGFDSLLGRRSLKRTDFVVGDRLGEGSFGVVYSGAIVPKNVSVEDRVQKRGRALEIDGRFKEKVILKKVKVGIQGAEECGDFEEWFNYRLSRAAPETCAEFLGSFVADKTNSQFTKGGKWLVWKFEPMSQGDRDLADYLKDRNFPLNLESIMFGRILQGLDSIERNALIIKQIMRQIITSLKKIHDTGIVHRDVKPANLVVTRKGQIKLIDFGAATDLRIGKNFVPNRGLLDPDYCPPELYVLPEETPTPPPEPVAALLSPILWQLNSPDLFDMYSAGITFLQMAIPTLRSTAGLKNFNSEIKTVGYDLKKWKEVTRLRPDLRILNLDSGRGWDLATRLISERGFLRRGRLSAAAALRHPYFLLGGDQAAAVLSKLSLSKYNRRKK* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00845 513 ProSitePatterns Serine/Threonine protein kinases active-site signature. 316 328 IPR008271 GO:0004672|GO:0006468
Eupl01g00845 513 Gene3D Phosphorylase Kinase; domain 1 132 252 - -
Eupl01g00845 513 SMART serkin_6 144 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00845 513 Pfam Protein kinase domain 296 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00845 513 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 48 507 - -
Eupl01g00845 513 SUPERFAMILY Protein kinase-like (PK-like) 141 490 IPR011009 -
Eupl01g00845 513 Gene3D Transferase(Phosphotransferase) domain 1 287 491 - -
Eupl01g00845 513 ProSiteProfiles Protein kinase domain profile. 144 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00845 513 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00845 Eupl-Chr1 26963077 26967930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00845 287 489 PP2C-type Phosphatase Gene Family AT3G63340 25.283 7.42e-10 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Eupl01g00845 Pkinase 1.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00845 - - nnu:104588359 818.535