Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00841 ATGGCAGATGAAACTCCTGCTATTGACGTGAAGGACGAGGGGGCAGAACTTGCCCCATTCGATCCTACAAAAAAGAAAAAGAAGAAGAAGGTTGTAATTCAGGATACTGCAGATGATTCTATGGATAAGTTGGCTGAGAAAACAGAAAGTTTGTCAGTTTCTGATGGGCTTGAAAGTACTTTTGCTGGTTTAAAGAAGAAGAAGAAGAAACCAGTTGAGACAGAATTTATGAATGATGAGAATGAGGATGCGGGAGAAGTTCCGGATGATAACATAAGAGAGGATGAAGAAGGAGAAGGGATTGTCCTGCAAGCACGGTATCCTTGGGAAGGAAGTGAGCGAGACTATGAATATGAAGAGCTTCTAGGTCGAGTGTTCAACATCCTGCGTGAGAATAATCCAGAGCTTGCAGGAGATAGACGTAGGACAGTGATGAGGCCACCACAAGTACTACGTGAAGGCACCAAAAAGACAGTCTTTGTGAATTTTATGGATCTATGCAAGACGATGCATAGGCAACCAGAGCATGTCATGACTTTCTTACTTGCTGAAATGGGAACAAGTGGATCACTGGATGGACACCAGAGATTAGTTGTTAAGGGAAGATTTGCTCCCAAAAATTTTGAAGGGATTCTGCGAAGATACGTCAATGAATACGTCATATGCAATGGCTGCAAAAGTCCAGACACAATTCTTTCAAAGGAAAACCGCTTGTTCTTTCTTAGATGCGAGCAGTGTGGTTCTGGGCGGTCAGTCGCTCCCATCAAGGCTGGTTTCGTTGCTCGCGTTGGGCGTCGGAAGACGGGGACATAA 813 0.4428 MADETPAIDVKDEGAELAPFDPTKKKKKKKVVIQDTADDSMDKLAEKTESLSVSDGLESTFAGLKKKKKKPVETEFMNDENEDAGEVPDDNIREDEEGEGIVLQARYPWEGSERDYEYEELLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPEHVMTFLLAEMGTSGSLDGHQRLVVKGRFAPKNFEGILRRYVNEYVICNGCKSPDTILSKENRLFFLRCEQCGSGRSVAPIKAGFVARVGRRKTGT* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00841 270 MobiDBLite consensus disorder prediction 1 42 - -
Eupl01g00841 270 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 111 269 IPR045196 GO:0003743|GO:0006413
Eupl01g00841 270 Gene3D - 113 255 - -
Eupl01g00841 270 Pfam Domain found in IF2B/IF5 139 248 IPR002735 GO:0003743|GO:0006413
Eupl01g00841 270 SMART eIF2Bneu4 140 249 IPR002735 GO:0003743|GO:0006413
Eupl01g00841 270 MobiDBLite consensus disorder prediction 66 92 - -
Eupl01g00841 270 MobiDBLite consensus disorder prediction 1 23 - -
Eupl01g00841 270 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 219 254 IPR016190 GO:0003743|GO:0006413
Eupl01g00841 270 MobiDBLite consensus disorder prediction 78 92 - -
Eupl01g00841 270 FunFam Eukaryotic translation initiation factor 2 subunit 113 255 - -
Eupl01g00841 270 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 115 222 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00841 Eupl-Chr1 26934701 26945731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00841 1 268 Eukaryotic Initiation Factors Gene Family AT5G20920 76.296 5.37e-141 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00841 K03238 - ming:122085628 473.781