Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00833 ATGGCGGGTCCTGATCTTCAACTCATGGATTTTAAGAGAAAACCCGCCAAATCTTTCTATGAGGAACAACCAGAACTTCTGAGACCATATTCTCATGGTGACAGTCACTTCCATTACTCCCTTACCAAACGAGTCCCCATGGACTACCCCAAACTCAATTCCTTCTCTTTTCCATCACTTCCTTTCCTTTTCCTTCTATTGCTTCTCCTACCTTTGGCCATTGCAGACCTGAATTCTGACAAACAAGCCCTTCTTGACTTTGCTGCTGCAGTCCCTCATGGTCGGAAACTCAACTGGGATCCTGCTACCCCCATCTGTTCCTCCTGGGTTGGCATCACTTGCGATGGTACCCGTGTGGTTACCCTCCACCTCCCCGGTGTTGGACTCTCTGGCCCAATCCCAGCCAACACTCTTGGAAAGCTTGATGCCCTCAGGATCCTCAGCCTCCGATCCAATGGCTTAAGTGGGAGTCTCCCTTCTGACATCTCCTCCCTTCCTTCCCTCCGCTACCTCTACCTCCAACATAACAACTTCTCAGGTGATATCCCTGCCTCTCTCTCCCCTGAAGTCAACTTAATTGATCTCTCCTTCAACTCCTTCACAGGCAACATTCCATCCACAATTCATAATCTGACCCGACTTACTGGATTAATCCTCCAGAACAACTCCCTCTCTGGACCCATCCCAGATCTCAACCTCCCAAGGCTCGGGCATTTGAATTTTAGCTACAACCACCTAAACGGCTCGATCCCATTTTCCCTCCAAAAGTTCCCAAGTTCTTCCTTCGTCGGGAACTCTCTCTTATGTGGACCGCCTCTTAACGAATGCTCTTCAATCCCCCCTTCAACTTCTCCTTCTCCTTCCCCTTCCCCTTCCCCTGCTTCCTTGCCACTCCCACCAACAGTTCCTCAAAAACTAATAGAGGGCTCTAAAAAGAAACTTGGAACTGGGGCTATCATTGCCATTGCAATTGGGGGCTCTGCATTGCTGTTTCTTCTAGTATTAGTGTTCTTTGTATGCTGTTTGAAGAGAAAAGATAGTGAAGGAAGTGGTGTGTTGAAAGGGAAGGTCTCTGGTGGTGGAAGGAGCGAGAAGCCTAAGGAGGTGTTTGGGAGTGGGGTGCAAGAGGCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGCTGTTCTTATAACTTTGATCTTGAGGATCTATTGAGGGCTTCGGCCGAAGTGCTGGGGAAGGGGAGTTATGGTACGGCCTATAAGGCAATCTTGGAGGAGGGGACAACTGTGGTGGTCAAGAGGTTGAAGGAAGTGATGGCAGGGAAGAGGGAATTTGAACAGCAGATGGAAATCGTGGGGAGGGTCGGGCAGCACCCGAATGTTGTACCCCTCCGCGCTTATTACTATTCCAAGGATGAGAAGCTCCTTGTTTGTGACCATGTTCCGGCTGGCAGCTTGTCTTCACTCTTGCATGGAAACAGGGGCACTGGAAGAACGCCACTAGACTGGGAATCCAGGGTGAAGATCTCCCTTGGAACTGCAAGGGGCATTGCTCACATCCACGCCGAAGGTGGCGGGAAATTCACTCATGGCAACATAAAATCCTCTAACGTTCTCCTCAACCAAGACCTCGATGGCTGCATTTCAGATTTTGGCCTGACCCCACTTGTGAACTTCCCTGCCACCCCATCTAGAAGTACAGGCTACCGCGCTCCCGAGGTGATTGAAACCCGAAAACCAACTCAGAAATCTGACGTGTACAGCTTTGGCGTCCTTCTCCTTGAGATGCTGACGGGTAAAGCCCCACTCCAATCACCGGCACACGATGACGTGGTTGATCTCCCCAGATGGGTCCAGTCAGTTGTCAGAGAGGAATGGACAGCTGAGGTATTCGATGTAGAGCTGATGAAATATCAAAATATCGAAGAAGAGATGGTTCAGATGTTGCAGATAGCTATGGCCTGCGTTGTGAAAATGCCAGACATGCGACCTAAGATGGACGATGTTGTGAAGATGATTGAGGAAGTCCGACAATCCTACTCGGATAACCGCGCATCGTCCGAAGAGAACAAGTCGAAGGATTCAAATGTGCAGACCCCATGA 2085 0.4969 MAGPDLQLMDFKRKPAKSFYEEQPELLRPYSHGDSHFHYSLTKRVPMDYPKLNSFSFPSLPFLFLLLLLLPLAIADLNSDKQALLDFAAAVPHGRKLNWDPATPICSSWVGITCDGTRVVTLHLPGVGLSGPIPANTLGKLDALRILSLRSNGLSGSLPSDISSLPSLRYLYLQHNNFSGDIPASLSPEVNLIDLSFNSFTGNIPSTIHNLTRLTGLILQNNSLSGPIPDLNLPRLGHLNFSYNHLNGSIPFSLQKFPSSSFVGNSLLCGPPLNECSSIPPSTSPSPSPSPSPASLPLPPTVPQKLIEGSKKKLGTGAIIAIAIGGSALLFLLVLVFFVCCLKRKDSEGSGVLKGKVSGGGRSEKPKEVFGSGVQEAEKNKLVFFEGCSYNFDLEDLLRASAEVLGKGSYGTAYKAILEEGTTVVVKRLKEVMAGKREFEQQMEIVGRVGQHPNVVPLRAYYYSKDEKLLVCDHVPAGSLSSLLHGNRGTGRTPLDWESRVKISLGTARGIAHIHAEGGGKFTHGNIKSSNVLLNQDLDGCISDFGLTPLVNFPATPSRSTGYRAPEVIETRKPTQKSDVYSFGVLLLEMLTGKAPLQSPAHDDVVDLPRWVQSVVREEWTAEVFDVELMKYQNIEEEMVQMLQIAMACVVKMPDMRPKMDDVVKMIEEVRQSYSDNRASSEENKSKDSNVQTP* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00833 694 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 475 681 - -
Eupl01g00833 694 FunFam Leucine-rich repeat receptor-like protein kinase 79 187 - -
Eupl01g00833 694 Pfam Leucine rich repeat 133 178 IPR001611 GO:0005515
Eupl01g00833 694 FunFam Leucine-rich repeat receptor-like protein kinase 188 276 - -
Eupl01g00833 694 FunFam pollen receptor-like kinase 1 368 474 - -
Eupl01g00833 694 ProSiteProfiles Protein kinase domain profile. 399 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00833 694 MobiDBLite consensus disorder prediction 278 301 - -
Eupl01g00833 694 Pfam Protein kinase domain 402 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00833 694 ProSitePatterns Protein kinases ATP-binding region signature. 405 436 IPR017441 GO:0005524
Eupl01g00833 694 SUPERFAMILY L domain-like 90 273 - -
Eupl01g00833 694 Gene3D Ribonuclease Inhibitor 78 189 IPR032675 -
Eupl01g00833 694 CDD STKc_IRAK 405 669 - -
Eupl01g00833 694 Gene3D Ribonuclease Inhibitor 190 278 IPR032675 -
Eupl01g00833 694 Pfam Leucine rich repeat N-terminal domain 78 115 IPR013210 -
Eupl01g00833 694 SUPERFAMILY Protein kinase-like (PK-like) 403 668 IPR011009 -
Eupl01g00833 694 Gene3D Transferase(Phosphotransferase) domain 1 475 693 - -
Eupl01g00833 694 MobiDBLite consensus disorder prediction 282 300 - -
Eupl01g00833 694 Gene3D Phosphorylase Kinase; domain 1 367 474 - -
Eupl01g00833 694 PANTHER OS05G0588300 PROTEIN 63 681 - -
Eupl01g00833 694 MobiDBLite consensus disorder prediction 674 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00833 Eupl-Chr1 26811706 26818202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00833 62 692 Receptor kinase-like Gene Family AT5G58300 68.504 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Eupl01g00833 Pkinase 3.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00833 - - nnu:104593739 976.852