Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00826 ATGTCGAGAGTGATCTTTTGCATATCAGTACCTGTTCTAGCTGTTTCCTTGTGTTGGTTCGCGCTTCTTTCGGTAGCACATGTTACCGACCCAATCGAAGTCAATGCATTGCAAGCTATCAAGGATCGTCTTGTTGATCCCTTGAAGCATCTCAACAGTTGGAATAAAGGGGATCCATGTAGTTCGAAATGGGCAGGGGTTTTGTGCTTCAATACAACAGGGAACGACGGATACTTGCATGCTCAAGAATTGCAACTGCTAAATATGAATCTTTCTGGAACTTTAGCACCTGAGGTTGGCCAACTATCGCATTTGCAAATACTAGATTTTATGTGGAACAAGATAAGTGGCAGTATACCCAAGGAGATTGGCAATATTGCATCGTTGGAACTCCTGCTTTTGAGTGGAAACCAATTATCAGGTTCTCTACCAGATGAGATAGGATATCTTCCTAATCTAGATAGAATCCAAGTTGATCAAAATTGTTTATCTGGGCCAATACCAAAATCTTGGGCAAATTTGAACAAAACTAAGCACTTCCACATGAACAATAACTCATTCAGTGGGCAAATTCCACCGGAACTTTCGAGATTACCAAGTGTTGCTCACTTCCTTCTGGACAATAACAATTTATCGGGGTATCTTCCGCCGGAGTTTTCTAAGATTCCTAACTTGCTTATCCTCCAATTTGATAACAATCACTTCGAGGGGAGCGAAATTCCAGCTTCTTATGGAAACCTATCAAAACTGGTGAAATTGAGTCTTAGGAACTGCAGCTTGGTAGGAGCTGTTCCTGACCTTAGCAGGATTCCTAACCTCCACTATATAGATCTTAGCTGGAATAAGCTTACTGGATCCATACCTTTAAAAAAGCTGTCTGATAATATCACTACTATCATTCTGTCAAACAACAATCTCAATGGATCTATTCCCTCAAATTTCTCAGGTCTTCCTCATCTCCAGAAATTGTTACTTGAGAACAATTTGTTCAGTGGTTCTGTTCCTTCCACCATTTGGCAGAATATGACTTTCAGTGCATCTGCAACACTTACCATGGATTTCCGAAACAATACACTTTCAAATATTTCGGGTGCTCTTAATCCTCCAGAAAATGTCACCATAAGGCTTCAAGGCAATCCTGTCTGCATCAGTGCAAATGAACTCAATATAGTCCAGTTCTGTGGATCTGAAACTGGAGGGAACAGGACACCAGGAAACTCAACCAACTCCAGAGTAATTTGTTCTATGCAATCATGTCCTACAGAGGATTTCTTTGAATATGTCCCAGCATCCCCTGTGACATGCTTTTGTGCTGCACCTCTTAGAATTGGATATCGGTTGAAGAGTCCTAGCATCTCAGATTTCCCTCCGTATGTTGACTCATTTGAGGTGTACATAACCTCTGCTCTCAACTTGGATCTCTATCAGCTATACATTGATTCATTTATCTGGGAAGAAGGTCCTAGGCTAAGAATGTACTTGAAGTTCTTTCCTATGTTTGATAATCATTCTAGTCAATTCAATATAAGTGAGATTCAACGAATTAGAAGCATATTCACAACATGGACATTAGCTAGAAACAATCTCTTCGGACCATATGAACTACTCAACTTCACTCTCCTGGGACCTTATTTAAATGTGATTTTTGAGTCTCCCAAGTCTGGGATAAGCAAGGGTGCCTTGGCTGGTATTGTATTGGGGGCCATAGCCTGTGCATTAACAATATCAGCAGTTGTTGCAATTCTTCTTACAAAAAGTCATGCTGGATTCCGTACATCACCAAGAAAACATCTATTGTCAGGAATCCCAATTAAAATCGATGGTGTGAAAGCCTTCAATTTCGGAGAAATGGCACTGGCAACGAGCAATTTCAGCGACTCCACTCAAATTGGCCAAGGAGGCTACGGAAAGGTCTATAAAGGTATTCTAGCTGACAAAACAGTTGTGGCTATAAAGCGCGCACAAGAAGGGTCTTTACAAGGTCAGAAAGAATTCCTCACAGAGATAGAGCTGTTGTCACGATTACATCATCGAAACCTGGTCTCTTTGATTGGATATTGCAACGAAGATGGGGAACAGATGTTGATTTATGAGTTCATGCCGAATGGCACGCTGCAGGATTGCCTTTCTGCCAAATCGAAAGAACCTCTCAGTTTTCCTATGAGGTTGCGTATAGCGTTGGGTTCGGCCAAGGGCATCCTCTACCTGCATACTGAAGCGGACCCGCCCATATTCCACCGAGATATCAAAGCCAGCAACATATTGTTAGACTCTAAGTTTACTGTTAAGGTTGCCGATTTTGGACTCTCACGGCTTGCACCAGTTGCAGATTGTGAAGGGGTTGTGCCTGGCCATGTATCCACCATTGTGAAGGGTACCCCAGGCTACCTTGACCCAGAATACTTCTTAACGCGCAAATTGACAGATAAGAGCGATGTCTATGGCCTCGGAGTAGTATTTCTAGAGCTCTTGACAGGGATGCAGCCAATCTCGCATGGTAAAAACATTGTCCGAGAGGTGAATGCAGCATATCAATCTGGTATTGTCTTTGCAGTCATAGACAACCATATGGGCTCTTATCCTTCCCAATGTGTTGACAAGTTCATGGAATTGGCCCTCAGATGTTGCCGGGACGATCCGGAAGAGAGACCTACAATGTTGGAGGTGGTCAGGGAGCTAGAGACTATATGGTGTATGTTGGCGGAATCAGACACCATACCATCGGAATTCACAGGTATCGACTCCGAAGAAGTTATGGAGATGCCACCTTCGTCATCTGGGAACACATACATATATTCTGGAGATATGATAGCATCAGCGACATCATTCTCTGTGACTAGGACTCCATTCATCTCATCCGACATATCTGGAAGCGACCTTCTGAGTGACGTGAATCCCACCATAAATCCTCGCTGA 2916 0.4283 MSRVIFCISVPVLAVSLCWFALLSVAHVTDPIEVNALQAIKDRLVDPLKHLNSWNKGDPCSSKWAGVLCFNTTGNDGYLHAQELQLLNMNLSGTLAPEVGQLSHLQILDFMWNKISGSIPKEIGNIASLELLLLSGNQLSGSLPDEIGYLPNLDRIQVDQNCLSGPIPKSWANLNKTKHFHMNNNSFSGQIPPELSRLPSVAHFLLDNNNLSGYLPPEFSKIPNLLILQFDNNHFEGSEIPASYGNLSKLVKLSLRNCSLVGAVPDLSRIPNLHYIDLSWNKLTGSIPLKKLSDNITTIILSNNNLNGSIPSNFSGLPHLQKLLLENNLFSGSVPSTIWQNMTFSASATLTMDFRNNTLSNISGALNPPENVTIRLQGNPVCISANELNIVQFCGSETGGNRTPGNSTNSRVICSMQSCPTEDFFEYVPASPVTCFCAAPLRIGYRLKSPSISDFPPYVDSFEVYITSALNLDLYQLYIDSFIWEEGPRLRMYLKFFPMFDNHSSQFNISEIQRIRSIFTTWTLARNNLFGPYELLNFTLLGPYLNVIFESPKSGISKGALAGIVLGAIACALTISAVVAILLTKSHAGFRTSPRKHLLSGIPIKIDGVKAFNFGEMALATSNFSDSTQIGQGGYGKVYKGILADKTVVAIKRAQEGSLQGQKEFLTEIELLSRLHHRNLVSLIGYCNEDGEQMLIYEFMPNGTLQDCLSAKSKEPLSFPMRLRIALGSAKGILYLHTEADPPIFHRDIKASNILLDSKFTVKVADFGLSRLAPVADCEGVVPGHVSTIVKGTPGYLDPEYFLTRKLTDKSDVYGLGVVFLELLTGMQPISHGKNIVREVNAAYQSGIVFAVIDNHMGSYPSQCVDKFMELALRCCRDDPEERPTMLEVVRELETIWCMLAESDTIPSEFTGIDSEEVMEMPPSSSGNTYIYSGDMIASATSFSVTRTPFISSDISGSDLLSDVNPTINPR* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00826 971 Pfam Protein tyrosine and serine/threonine kinase 628 893 IPR001245 GO:0004672|GO:0006468
Eupl01g00826 971 ProSiteProfiles Protein kinase domain profile. 624 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00826 971 FunFam Leucine-rich repeat protein kinase family protein 591 699 - -
Eupl01g00826 971 ProSitePatterns Protein kinases ATP-binding region signature. 630 652 IPR017441 GO:0005524
Eupl01g00826 971 Gene3D Phosphorylase Kinase; domain 1 600 699 - -
Eupl01g00826 971 Gene3D Ribonuclease Inhibitor 31 194 IPR032675 -
Eupl01g00826 971 Gene3D Ribonuclease Inhibitor 267 421 IPR032675 -
Eupl01g00826 971 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 700 909 - -
Eupl01g00826 971 Gene3D Transferase(Phosphotransferase) domain 1 700 905 - -
Eupl01g00826 971 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 31 192 - -
Eupl01g00826 971 SUPERFAMILY Protein kinase-like (PK-like) 610 911 IPR011009 -
Eupl01g00826 971 Pfam Leucine rich repeat N-terminal domain 33 69 IPR013210 -
Eupl01g00826 971 Gene3D Ribonuclease Inhibitor 199 266 IPR032675 -
Eupl01g00826 971 ProSitePatterns Serine/Threonine protein kinases active-site signature. 744 756 IPR008271 GO:0004672|GO:0006468
Eupl01g00826 971 SMART serkin_6 624 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00826 971 SUPERFAMILY L domain-like 46 385 - -
Eupl01g00826 971 CDD STKc_IRAK 630 896 - -
Eupl01g00826 971 PANTHER RECEPTOR-LIKE PROTEIN 55 39 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00826 Eupl-Chr1 26629182 26664834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00826 12 896 Receptor kinase-like Gene Family AT5G01950 61.461 0.0 1077
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Eupl01g00826 PK_Tyr_Ser-Thr 1.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00826 - - psom:113323365 1446.03