Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00810 ATGTTATCTGCTTCGAGGTGCTTTAGGGTTTGTGAGTTATTCCGACGCAGAGTCGAGATGAACGCTCACCGCGCTAGTCGCAGAGCGGCGTTTTTGTGCCGATTTGATCATAATTTGAGTAAAAATATTGTTTTTTCTCAAGAACACTGCATTCGCAGTGGCGTTGAAGGACTGAAGAATGGAAAATATCTGTATTCCAGAGAACTTCTTTATAGGCGTAACCCAACGGATGTCGTGAGGAAAGACGGTTTTCTTAAACATCTAAAGGGATTTCTATCGGACTCTCCGTCGAGGGGGAACAGACCTTACAGAGAATCCAGTTCTATACAGAAGGGGTACGCATTGTTCTCAACATCAACTAGTGATATAACGGGTGCAAAGCAAGTTGAAACTAAAATGGTCAAAAAAGAACCTCCAGAACAAGAAGTTGCTGACATGAGGATCCTCCGTACTCTCGCGAAGTACTTATGGTTGAAAGATAACTTTAATTTCCGCTTGAGGGTGGTATTGGCAATGGGTCTTCTCATTGGATCAAAAGTTCTAAATGTTCAAGTGCCTTTCTTGTTCAAGCTTGCGGTTGATTGGTTGTCAACTGCAACTGGGACTGGTAGTTCACTTGCTTCATTTTCAAGTGCTAATTCCACTATTTTGGCGCTTTTCGTGAGCCCAGCAGCTGTTCTAGTTGGATATGGAATAGCACGGGCAGGGGCATCTGCGTGCAATGAATTGCGGAATGCTGTGTTTTCTAAGGTGGCCTTGCGTACAATCCGGACAGTTTCTAGGAAGGTGTTTTCACATTTGCTTGACCTTGACCTTGGATATCATCTAAGCCGGCAAACTGGTGCACTACATCGCATTATTGATCGTGGTAGCCGTGGGATAAATTTTATTCTTACATCAATGGTATTCAGTGTTGTACCTACCATCTTAGAGATTTCTATGGTGTCAGGTATACTGGCATACAAATTCGGAACATCTTTTGCGTGGATCACATCCTTATCAGTTGCTGCATATGTTGCTTTCACGTTGATTGTGACACAGTGGCGAACTAAGTTTAGGCAGGCCATGAATAAAGCTGATAATGATGCAAGTTCAAGGGCAATTGATTCACTTATCAATTATGAGACTGTCAAGTATTTCAATAATGAGGCCTTTGAAGCTGAGAAATATGATGAATTCTTAGAGAGATACGAAAATGCTGCTTTAAAAACACAAAGTAGTCTTGCTTTTTTAAACTTTGGCCAAAATGTTATATTTAGCATGGCTCTGTCAACAGCAATGGTGTTGTGTTCACATGGAATTATGAATGGCGAGGCGACAGTTGGAGATCTGGTTATGGTGAATGGGCTTCTTTTTCAGCTATCTCTTCCTCTCAACTTCCTTGGCAGTGTATATCGTGAGACTAGACAGAGTCTTGTTGACATGAAGTCCATGTTTCATTTACTTGAGGAGAGACCTGGAATTAGAGATAGACCTGACGCAAACCCTCTAAAGTTGAGTGGAGGAAGCATTCAATTTGAAAATGTACACTTCGGATACCTGCCAGAACGGAAGATTCTTGATGGTATATCTTTTGTTGTAGCAGCAGGAAAAAGTGTGGCTATTGTTGGAACCAGTGGCAGTGGTAAGTCAACAATACTAAGATTGCTCTACAGATTTTTTGACTGTCAATCTGGAGCTATAAGAATAGATGGTCAACACATACAAGATGTGACAGTTGAGAGTCTTCGGAAGGCTATTGGTGTTGTACCACAGGATACTGTACTTTTCAATGATACAATATTCCACAACATTCGTTATGGCCGTCTATCAGCAACAGAGGAGGAGGTGTATGAAGCTGCTCGACGTGCTGCTATCCATGATACTATCATGAAGTTTCCAGCTAAATATTTAACTGTGGTTGGAGAACGTGGACTCAAGTTAAGTGGTGGCGAAAAGCAGCGGGTAGCACTTGCTCGTGCATTCTTGAAAGCACCTGCTATTTTGCTATCTTGGTGTGAATCTAGGCCATTACGGTGCGAAACTGAAGGTATCCTATCAAATCGCAGAACGGCCTCCCGTCTAACTTCAAATTTGGTATCGGAGCCGAAATCCTTATTGTGTTTTGGAAAGATGTCTCAGATTGGTTCGCGATCTTTGGAAATCGCGTTAATTAAACTAAACGATGTGATAAATCGTTTTGAGAGCAGGCTGGACGAGGCAATCAATACCCATAAGAAGACCCTCGAGGACTTTAATAAGAAGATCTCCGCTGGAGTTCCAATCCGTTGCCGCCGCCTGTCTTGGGCGTCATTGTCACCATCGCCGACTTTTCCACCTCTCTCTGGTGAGTTATTGGTGCCAAAAGTTGCTATATCTGTTACTAAGGCTTCAACTCTGAAGAAGGTGACCCAAGAGAAAGAAGAGATGGAAGATTGGGTTCCAAAATCTCTTAATCCTCCTATCACAGAAGAGATGAAATATGAACCTCCATTATTGGAAAGCTTTGCAACTAATTATCTTGGATTAATAGGAGATGAGAAATTACTTGTCTTGTACCACTACGCTGGAGAAATATGGTGGTCGTTCTAA 2571 0.422 MLSASRCFRVCELFRRRVEMNAHRASRRAAFLCRFDHNLSKNIVFSQEHCIRSGVEGLKNGKYLYSRELLYRRNPTDVVRKDGFLKHLKGFLSDSPSRGNRPYRESSSIQKGYALFSTSTSDITGAKQVETKMVKKEPPEQEVADMRILRTLAKYLWLKDNFNFRLRVVLAMGLLIGSKVLNVQVPFLFKLAVDWLSTATGTGSSLASFSSANSTILALFVSPAAVLVGYGIARAGASACNELRNAVFSKVALRTIRTVSRKVFSHLLDLDLGYHLSRQTGALHRIIDRGSRGINFILTSMVFSVVPTILEISMVSGILAYKFGTSFAWITSLSVAAYVAFTLIVTQWRTKFRQAMNKADNDASSRAIDSLINYETVKYFNNEAFEAEKYDEFLERYENAALKTQSSLAFLNFGQNVIFSMALSTAMVLCSHGIMNGEATVGDLVMVNGLLFQLSLPLNFLGSVYRETRQSLVDMKSMFHLLEERPGIRDRPDANPLKLSGGSIQFENVHFGYLPERKILDGISFVVAAGKSVAIVGTSGSGKSTILRLLYRFFDCQSGAIRIDGQHIQDVTVESLRKAIGVVPQDTVLFNDTIFHNIRYGRLSATEEEVYEAARRAAIHDTIMKFPAKYLTVVGERGLKLSGGEKQRVALARAFLKAPAILLSWCESRPLRCETEGILSNRRTASRLTSNLVSEPKSLLCFGKMSQIGSRSLEIALIKLNDVINRFESRLDEAINTHKKTLEDFNKKISAGVPIRCRRLSWASLSPSPTFPPLSGELLVPKVAISVTKASTLKKVTQEKEEMEDWVPKSLNPPITEEMKYEPPLLESFATNYLGLIGDEKLLVLYHYAGEIWWSF* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00810 856 FunFam ATP-binding cassette sub-family B member 7 140 492 - -
Eupl01g00810 856 SUPERFAMILY ABC transporter transmembrane region 152 492 IPR036640 GO:0005524|GO:0016020
Eupl01g00810 856 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 494 663 IPR027417 -
Eupl01g00810 856 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 504 753 IPR003439 GO:0005524
Eupl01g00810 856 Pfam ABC transporter 520 663 IPR003439 GO:0005524
Eupl01g00810 856 SMART AAA_5 529 639 IPR003593 GO:0016887
Eupl01g00810 856 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 151 663 IPR039421 -
Eupl01g00810 856 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 169 470 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g00810 856 Gene3D ABC transporter type 1, transmembrane domain 155 492 IPR036640 GO:0005524|GO:0016020
Eupl01g00810 856 Gene3D - 498 664 IPR027417 -
Eupl01g00810 856 Pfam ABC transporter transmembrane region 169 457 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Eupl01g00810 856 ProSitePatterns ABC transporters family signature. 641 655 IPR017871 GO:0005524|GO:0016887
Eupl01g00810 856 Coils Coil 717 744 - -
Eupl01g00810 856 CDD ABC_6TM_ATM1_ABCB7 171 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00810 Eupl-Chr1 26400899 26419547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00810 314 711 Calmodulin-binding Proteins AT2G36910 30.569 1.55e-43 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00810 K05662 - psom:113310733 982.245