Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00808 ATGGAGGAGAAGAAGAAATGTAAGGTGCAGGAGACACTTGAAAGTATGGTCCCCTTCGGATGTGTTGGATGTTCATCTTCCTCCACGCCCATATCATCAGGTTTCGAAGTGGGTTCTTCGAGCTCGAACATGGGCGTCGAGAATGGATATTCAACTTCCTCAAGGCTAGTATCATCAAGTATGCAAGACCGGGCTTCGAGCTCGAACAATGCCGCTAGTAACGCAGAACCAAACCAGCGGAAGTTACTCTTTGAGAAGACATTGTCCCCTAGTGATGTGGGTGAGTTCAACATGCTCGTCGTCCCGAAAAAGTTCGCCATGGCCTACTTGCCTACTCTAAAGACGAACAATGATAATTACAAGAAAGAGACGCTAAAATTCTACGATAATCAAAACATGGCATGGGATATGACGTTCGAATTCTGGCCGGCGAGCCAAAGCTACGCATTAACCAGGGGTTGGAAGGCATTCATAAATCACCATGGGTTGCAACATAGTGATGTAGTCTGTGTTTATGAACTTGAGCTAAACCCCAAGATTTATGGCATCGACTATCGCCGGCATCTTCGAGTCCCCAAGACAATTAGATTGTTTGGTGAAGACTACATTTACGAGTATACAAGTGCTAGTAATGGTGGCGATGGCACTCACAGCAACACCGGTCCACGTCGAAGAATTCGAAAAGCTTTCCCAGGAGGCGGTAACATTGTTCACCACCTTCCACGCCAGCTTGCTGGTGCCGACTATGATTTTGCCGATCACTACAAATTGCCATTCGTCCAAGCTTGGGGAGGGATTATGGGTCCTTCTCGACAGGCAGACGACATCTTCATCCTCAAAGCGGAAGCTTGA 852 0.473 MEEKKKCKVQETLESMVPFGCVGCSSSSTPISSGFEVGSSSSNMGVENGYSTSSRLVSSSMQDRASSSNNAASNAEPNQRKLLFEKTLSPSDVGEFNMLVVPKKFAMAYLPTLKTNNDNYKKETLKFYDNQNMAWDMTFEFWPASQSYALTRGWKAFINHHGLQHSDVVCVYELELNPKIYGIDYRRHLRVPKTIRLFGEDYIYEYTSASNGGDGTHSNTGPRRRIRKAFPGGGNIVHHLPRQLAGADYDFADHYKLPFVQAWGGIMGPSRQADDIFILKAEA* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00808 283 ProSiteProfiles B3 DNA-binding domain profile. 84 189 IPR003340 GO:0003677
Eupl01g00808 283 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 60 200 IPR044800 GO:0003700
Eupl01g00808 283 Pfam B3 DNA binding domain 84 172 IPR003340 GO:0003677
Eupl01g00808 283 SMART B3_2 84 186 IPR003340 GO:0003677
Eupl01g00808 283 MobiDBLite consensus disorder prediction 46 77 - -
Eupl01g00808 283 Gene3D - 71 192 IPR015300 -
Eupl01g00808 283 SUPERFAMILY DNA-binding pseudobarrel domain 80 172 IPR015300 -
Eupl01g00808 283 CDD B3_DNA 83 172 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00808 Eupl-Chr1 26374173 26377466 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00808 62 192 RAV Transcription Factor Family AT3G61970 34.848 1.13e-20 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl01g00808 B3 4.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00808 K09287 - ming:122080338 147.902