Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00781 ATGGGCAACTGCGGTACCAGAGAGGAATCGTCTGTCGTTGCCAATGCTCAAGTTCAGCAGCTACATATGTTCCCTTTGCCTGTTAAGAACACGCCTTCTGATAAGAGGCACAATCGATCATTTTCGGATTTGAGCTATCCTTCAACCCCTCGCAACATTGAAGACGCACAAAAAAATGCAATGCTATACACTGATGTCATCGCCTTTACGTTATTCGAACTCGAGACCATCACCAAAAGCTTCCGTTCGGATTACATCCTCGGCGAGGGTGGGTTCGGTACCGTTTATAAGGGTTACATTGACGAGAATGTGAGGGTTGGCCTCAAATCTCTCCCTGTGGCCGTCAAGGTCCTTAATAAACAGGGCCTTCAAGGTCATAGAGAATGGCTTACAGAGGTTAATTTTCTAGGGCAGCTTAGACATCCAAATCTTGTGAAGTTAATCGGATATTGCTGTGAGGATGATCATAGGTTACTTGTGTACGAGTTCATGTTCCGAGGCAGCCTTGAAAACCACTTGTTTCGAAAGGCAGCTGTTCCACTACCTTGGGCGACAAGAATGATGATTGCACTTGGAGCTGCCAAAGGGCTTGCTTTCCTTCACAACGCGGAAAGGCCCGTTATCTACCGGGACTTCAAGACCTCAAATATATTGTTGGACTCTGATTATACTTCCAAGCTGTCTGATTTTGGGCTTGCAAAAGCTGGACCCCAAGGTGATGAGACCCATGTATCCACTCGTGTTATGGGTACCTACGGTTATGCTGCGCCTGAATACGTAATGACCGGTCACCTGACTGCTAGGAGTGACGTCTACAGCTTTGGTGTTGTCCTTCTTGAGCTGTTGACAGGAAGGCGGTCTGTGGACAAGACACGACCCAGCAAGGAGCAGAGCTTGGTTGACTGGGCTCGCCCCAAGCTTAATGACAAGAGAAAGTTGCTGCAGATACTTGATCCTAGATTGGAAAATCAGTACTCCATGAGGGCTGCGCAGAAAGCCTGCAGCTTGGCGTACTATTGCCTGAGCCAGAACCCTAAAGCAAGGCCCCTCATGAGTGACGTGGTTGAGACACTGGAGCCCCTGCAAAGCAGCGGTGCAAGTGATGTCCCAACGCAGGGCCTGTTTGCAATTGGGCTCCCTGACCAGCGAATGCATCGTAGATTTGCAGGCAATGGTGCTGGCTGCCGGTCTCCCAATCCCAACTGTTCTCCAGGTGGCCCCGCAGCATGCAGGGTTAGATGA 1242 0.4976 MGNCGTREESSVVANAQVQQLHMFPLPVKNTPSDKRHNRSFSDLSYPSTPRNIEDAQKNAMLYTDVIAFTLFELETITKSFRSDYILGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKQGLQGHREWLTEVNFLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKAAVPLPWATRMMIALGAAKGLAFLHNAERPVIYRDFKTSNILLDSDYTSKLSDFGLAKAGPQGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRRSVDKTRPSKEQSLVDWARPKLNDKRKLLQILDPRLENQYSMRAAQKACSLAYYCLSQNPKARPLMSDVVETLEPLQSSGASDVPTQGLFAIGLPDQRMHRRFAGNGAGCRSPNPNCSPGGPAACRVR* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00781 413 FunFam Serine/threonine-protein kinase BIK1 48 163 - -
Eupl01g00781 413 SUPERFAMILY Protein kinase-like (PK-like) 59 359 IPR011009 -
Eupl01g00781 413 PANTHER OS01G0588500 PROTEIN-RELATED 49 362 - -
Eupl01g00781 413 Pfam Protein tyrosine and serine/threonine kinase 86 358 IPR001245 GO:0004672|GO:0006468
Eupl01g00781 413 CDD STKc_IRAK 87 361 - -
Eupl01g00781 413 ProSitePatterns Protein kinases ATP-binding region signature. 87 116 IPR017441 GO:0005524
Eupl01g00781 413 MobiDBLite consensus disorder prediction 25 49 - -
Eupl01g00781 413 ProSiteProfiles Protein kinase domain profile. 81 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00781 413 Gene3D Transferase(Phosphotransferase) domain 1 164 372 - -
Eupl01g00781 413 FunFam Probable serine/threonine-protein kinase PBL8 164 373 - -
Eupl01g00781 413 Gene3D Phosphorylase Kinase; domain 1 46 163 - -
Eupl01g00781 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00781 Eupl-Chr1 25906982 25914375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00781 45 370 Glycoside Hydrolase AT3G07070 50.445 1.60e-109 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl01g00781 PK_Tyr_Ser-Thr 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00781 - - nnu:104612939 751.51