Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00779 ATGGAGAAACTGAAATCTTTGGTTCCAAGCGCCCTGAAGCGAATGATTTCCGAAAGCACCCCCGAAGATCTTCCATCAACGTGTTCTTCGCTTCTCGATTTCTTTCTCCCTCTGCAGCTGTTTTACAACGTCATTCGAGAACTAACGAATCCAGACGTAGCTCTCTGTCGTAAGAACACTGACGCTGCTTTGGATTCGAAGCAGAAGGGCAATGTGTGCTTTTCGACTGGAGATTATGCGAAAGCCTTGAGTTTCTACTCTCAGAAAATGGGTCTTTTGGTGGAGTGCATACGAGACTGCAACCGGGCTGTTGTACTTTCCCCTAGCTACTCAAAGGCATGGTATAGGAGAGGGAAGGCAAATACTTCTTTGGAAAATTATGAAGATGCAATCTATGACTTGAATGTTGCTATGAGCATGGAAGTCTCTCTCGGTGGAAAGAGCCGGATAAAAGAGGAGCTTGATTTAATTTTAAATCAATCTCAGAGGACAAGCAGTTCACTCGATAAACACATTGAGAAGAAGTCGGGCCCCATTGTTGAGCCATACCAGATAAAACTACAATGTGTCTCAACACCAGCTAAAGGAAGGGGTATGGCTGCAGTGAGTGATATTGCACCAGCTTCCTTGATTCATTCAGAAGAACCTTATGCTGCGATTGTGTTGAAGCATTGCCGGGAAACGCATTGTCATTTCTGCTTGAATGAACTTCCAGCAGATACTGTGCCCTGTTCGTCATGTTCAATACCATTATACTGTTCCCAGCATTGCCAAGTACAAGCAGGTGGACAAAGATCTGGGAGCAATACAAACAGTTATCCTATCCATGAAAATATATCAACAGATCTTGTGAAATATATTGCAAGCATTACTTTGGCCAGTAATTCTGGATATGCTGTTGCTGATTCAAAGCTTGAGCAAGTTGCTGAACACAGACATGAATGTGGAGGTGTACATTGGCCTGCAATATTACCATCCGAAATCATTTTGGCAGGCCGAGCTCTGGTGAAATCAATAGAACAAGGGAGGCACTCCAGGGTGTCCATGAAGCTGATGGAAGCTTTGGAGCTTTCTCACGATTATGTACAAATGCCTTCGGAAAGCAAATTGGAGTTGCATATTTACTCAATTGTATTGGTTTACTGTCTTCAGCAGTCTTATGGCACTGAATTTCCATTGACTGGGGCTTCTGCTTCGCAATTGGTTATACTTGTATCTCAAATCAAGGTAAATGCTATGGCAGTTGTCCATATGAAGTCAATGGATGCATATGGCCCACCAGAGCAGTCACGAAAACTTTTACCTACAGAAGTTGCTTTAACAAATAATATAGAACAGGTGAGAGTAGGTCAAGCAATTTATTCAACTGGTAGTTTGTTTAACCATTCGTGTCAGCCAAACATCCATGCTTATTTCCTTTCACGTACTCTCTTTATACGATCAACAGAATTTGTGGCGGCTGGAAATCCACTGGAGCTATCTTATGGTCCACAGGTTGGGCAGTGGGATCTTAAAGACCGCCAACAATTGCTAGAAGATCAGTACTCATTCAAATGCCAGTGTAGTGGTTGTTCAGAATTAAACCTGTCTGACCTTGTTATAAATGCTTTTTCATGTGTGAAACCAAATTGTTTTGGCACAGTCTTAGATAGCCGTATAGTCAAGCATGAAAAACAGGAAGGTAGTCACTTTCAAGATGTTCCCACAATTTGCAGCTTGGAGCGCCCTCTTCCGGTTGACATGCTGAAAAGAGAAGACATAAAAAAAGTGGCTCACCTCCTGTTTGAACAAAAAGATAGTACCCTTCGAGTTGATCCTGGATATTGTTTGAGTTGTGGTTCTTATCGTGATCTGGGATCTTCACGAGCAGCAGCCAAGAAAGCTGAAAATTACATTGAGAGGTTGCACGGTGCAGTTGTTTCAAATGTAATTCCGACTATTATGCGCTCTGATGCTTTGAAATCTCTTGATCTCTTGAGATCAACAATGCATGTATATAACAAGGATATTGCGCAGGCAGAGGACAATCTTGCAGAGGTGTTTTGCTTGAGTAGAGACTTTCAACCTGCCTTGCACCACTGCAAAGCATCTATTGAGATCCTCGAGAAGCTTTACCATCCGAACCACATTGTCATTGGAAATGAGTTGGTGAAGCTTGCTTCCATTCAGCTATCCTTGGGTGACTGTACCTCCGCTGTGGACAGCATAAATCGGCTGGATGCAATATTTTCACTGTATTATGGATCTCATGCAACCAGAATATTTCCATACCTGGACAGCCTTAAGAGAGAAGCTGGCATGCTTAGTCAGCAAGGGTCCCCCCTCCGTTGTTGCAGTTCTAGTGGGAGGTCATAA 2355 0.4301 MEKLKSLVPSALKRMISESTPEDLPSTCSSLLDFFLPLQLFYNVIRELTNPDVALCRKNTDAALDSKQKGNVCFSTGDYAKALSFYSQKMGLLVECIRDCNRAVVLSPSYSKAWYRRGKANTSLENYEDAIYDLNVAMSMEVSLGGKSRIKEELDLILNQSQRTSSSLDKHIEKKSGPIVEPYQIKLQCVSTPAKGRGMAAVSDIAPASLIHSEEPYAAIVLKHCRETHCHFCLNELPADTVPCSSCSIPLYCSQHCQVQAGGQRSGSNTNSYPIHENISTDLVKYIASITLASNSGYAVADSKLEQVAEHRHECGGVHWPAILPSEIILAGRALVKSIEQGRHSRVSMKLMEALELSHDYVQMPSESKLELHIYSIVLVYCLQQSYGTEFPLTGASASQLVILVSQIKVNAMAVVHMKSMDAYGPPEQSRKLLPTEVALTNNIEQVRVGQAIYSTGSLFNHSCQPNIHAYFLSRTLFIRSTEFVAAGNPLELSYGPQVGQWDLKDRQQLLEDQYSFKCQCSGCSELNLSDLVINAFSCVKPNCFGTVLDSRIVKHEKQEGSHFQDVPTICSLERPLPVDMLKREDIKKVAHLLFEQKDSTLRVDPGYCLSCGSYRDLGSSRAAAKKAENYIERLHGAVVSNVIPTIMRSDALKSLDLLRSTMHVYNKDIAQAEDNLAEVFCLSRDFQPALHHCKASIEILEKLYHPNHIVIGNELVKLASIQLSLGDCTSAVDSINRLDAIFSLYYGSHATRIFPYLDSLKREAGMLSQQGSPLRCCSSSGRS* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00779 784 Coils Coil 656 676 - -
Eupl01g00779 784 Gene3D Tetratricopeptide repeat domain 504 775 IPR011990 GO:0005515
Eupl01g00779 784 Gene3D SET domain 405 495 IPR046341 -
Eupl01g00779 784 SUPERFAMILY SET domain 188 522 IPR046341 -
Eupl01g00779 784 SUPERFAMILY HIT/MYND zinc finger-like 224 260 - -
Eupl01g00779 784 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 88 766 - -
Eupl01g00779 784 SMART tpr_5 671 704 IPR019734 GO:0005515
Eupl01g00779 784 SMART tpr_5 63 96 IPR019734 GO:0005515
Eupl01g00779 784 SMART tpr_5 111 144 IPR019734 GO:0005515
Eupl01g00779 784 Gene3D Tetratricopeptide repeat domain 56 174 IPR011990 GO:0005515
Eupl01g00779 784 Pfam SET domain 371 496 IPR001214 GO:0005515
Eupl01g00779 784 SUPERFAMILY TPR-like 65 735 IPR011990 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl01g00779 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00779 K24634 - nnu:104612938 1028.08