Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00763 ATGAACAATCTCTTCTCGGGTTCTTTCACTCGATTCAGAGAAGATGATGATGATCGACAACATCCATCATCCGGCGGTGGTGGTGATGGTGTACAGATGGCGGCGGTGGGGGTTAATTTAGATAAGTTCTTCGAAGACGTTGAAGGGATCAAAGACGAGCTTAAAGAGGTGGAGAGATTACACCAGCGGCTTCAGGAGTCCCATGAAGAGAGCAAGACCCTGCACAACGCCAAGTCTATAAAAGATCTCCGCTCTCGTATGGATGCCGACATAGCTCTCGCACTTAAAAAGGCCAAACTGATTAAAGTCCGTCTCGAGGCTCTCGACCGTGCCAACGCAGCCAATCGCAGCCTCCCTGGATGCGGACCAGGCAGCTCCTCCGATCGCACACGCACCTCTCTCGTCAACGGCCTTCGAAAGAAGCTTAAAGACTCTATGGAGAGCTTCAGTACTCTCAGGCAGCAAATCACGTCGGAGTATAAAGACACCGTTAAGCGTAGATACTACACCGTTACAGGCGAAAACCCTGACGATCGGACGGTGGAGATCCTAATATCGACGGGCGAGAGCGAGACGTTTTTGCAGAAGGCGATACAAGAGCAAGGGAGAGGTCAAGTGCTGGATACCATAAGTGAGATTCAGGAGAGGCACGACGCGACCAAGGAGATAGAGAAGAGCTTGCAAGACCTGCACCAAGTGTTCCTAGACATGTCGGTGCTGGTGCAGGCGCAGGGGGAGCAGCTGGATGACATCGAGAGTCAGGTCGCCCGGGCAAATTCTTTCGTCCGGGGCGGGACCCAGCAGCTACAGACGGCTAGGAGTCATCAGAAGAACTCTCGCAAGTGGACTTGCTACGGGATCATCATTCTTCTCGTCGTCATCTTGATCATCGTCCTCCCCATCGTTATTAAGAATATGAACAACAATAAGAACAGTGGCACTCCAACAACAACTACACCTTCACCTCCAGCTCCAGCTCCACCATAA 987 0.5177 MNNLFSGSFTRFREDDDDRQHPSSGGGGDGVQMAAVGVNLDKFFEDVEGIKDELKEVERLHQRLQESHEESKTLHNAKSIKDLRSRMDADIALALKKAKLIKVRLEALDRANAANRSLPGCGPGSSSDRTRTSLVNGLRKKLKDSMESFSTLRQQITSEYKDTVKRRYYTVTGENPDDRTVEILISTGESETFLQKAIQEQGRGQVLDTISEIQERHDATKEIEKSLQDLHQVFLDMSVLVQAQGEQLDDIESQVARANSFVRGGTQQLQTARSHQKNSRKWTCYGIIILLVVILIIVLPIVIKNMNNNKNSGTPTTTTPSPPAPAPP* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00763 328 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 210 272 IPR000727 -
Eupl01g00763 328 Coils Coil 40 74 - -
Eupl01g00763 328 FunFam Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 37 167 - -
Eupl01g00763 328 MobiDBLite consensus disorder prediction 1 32 - -
Eupl01g00763 328 SUPERFAMILY t-snare proteins 38 265 IPR010989 GO:0016020|GO:0016192
Eupl01g00763 328 CDD SynN 40 197 IPR006011 GO:0016020
Eupl01g00763 328 PANTHER SYNTAXIN 57 297 IPR045242 -
Eupl01g00763 328 CDD SNARE_syntaxin1-like 209 271 - -
Eupl01g00763 328 Gene3D - 201 305 - -
Eupl01g00763 328 Pfam Syntaxin 42 245 IPR006011 GO:0016020
Eupl01g00763 328 Gene3D - 38 170 - -
Eupl01g00763 328 MobiDBLite consensus disorder prediction 308 328 - -
Eupl01g00763 328 SMART tSNARE_6 205 272 IPR000727 -
Eupl01g00763 328 FunFam Syntaxin 132 203 303 - -
Eupl01g00763 328 SMART SynN_4 35 161 IPR006011 GO:0016020
Eupl01g00763 328 Pfam SNARE domain 246 298 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00763 Eupl-Chr1 25588199 25590296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00763 37 284 SNARE and Associated Proteins AT3G11820 76.613 3.89e-143 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00763 K08486 - nnu:104590547 454.136