Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00757 ATGCAAACTGCGAGCTTTAAAGAACATGGAGGAATTGTCCATAATCTGATTGATCAGTCCTCCCCACTTCCTTCCATGCCTTGGTGGAGTGTGCTTGGATCTCAACCGATTTATGGTGAGACGATTGGGCAACTGAAGTCTTTATCTGGGGACCATCGGAGTGGTGAAGAACAACTCCCAGCCGCTCCTCAACAAGCGCAGCGTGGAACAGACCAAGGTCCAGAGAAAGAGAATTACAATACTTCTCAATTCACTATCTTTCCTGGTAACAACAAAGATTCTTGGAAGGGGCAGAAAGCTCAGCAATTTCCAACAACCATCTCTCAACAGTCATCTCCGCCTGGATACCAGGCTCGTTTTGAACTAGGACTTAGTCAACCTATGGTTTGTGCAAATTATCCCTACATGGATCAATATTATGGCGTATTTGCAACTTACGGAGCTCAGACACCGGGCCGCATGATGTTGCCATTGAATGTGACAACAGAAGATGGACCGATATTCGTAAATGCTAAGCAGTACCGCGGAATCATTCGGCGTCGACAGTGTCGTGCAAAGGCAGTGCTGGAGAATAAAGTGATCAAAGGTCGGAAGCCGTATCTGCACAAATCACGTCATCTCCATGCAATGCGTAGAGCAAGGGGATGCGGAGGTCGCTTCCTGACAAAGAATGGAAAGGGTGGGACTGACATGGACAAATCCGGGGATGGACAACTTTCTCAGCCTGCTGGGTCTTTGAGTTCGGAAGTTTTGCAACCCGAGAATGGAAATTTGTTCTCGTTGAAGGACACACATGGTGGCAGGTCGAGTCTATCGGGGTCGGAGGTGACTAGCATATACTCTAGGGGAGATCTCGACCACTTTCAGATTGATCATATCCGTCCATCTGCTTTCCACACTTTCTCAAACATGATGGATAGCGGGCAGGGTATCAGTATGCCAAACAAGTGGGTTACAGCAGTTGATGGCTGCTCTGACCCCCTCAAAGTTTGA 993 0.4794 MQTASFKEHGGIVHNLIDQSSPLPSMPWWSVLGSQPIYGETIGQLKSLSGDHRSGEEQLPAAPQQAQRGTDQGPEKENYNTSQFTIFPGNNKDSWKGQKAQQFPTTISQQSSPPGYQARFELGLSQPMVCANYPYMDQYYGVFATYGAQTPGRMMLPLNVTTEDGPIFVNAKQYRGIIRRRQCRAKAVLENKVIKGRKPYLHKSRHLHAMRRARGCGGRFLTKNGKGGTDMDKSGDGQLSQPAGSLSSEVLQPENGNLFSLKDTHGGRSSLSGSEVTSIYSRGDLDHFQIDHIRPSAFHTFSNMMDSGQGISMPNKWVTAVDGCSDPLKV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00757 330 Gene3D - 164 224 - -
Eupl01g00757 330 MobiDBLite consensus disorder prediction 234 250 - -
Eupl01g00757 330 MobiDBLite consensus disorder prediction 218 250 - -
Eupl01g00757 330 PRINTS CCAAT-binding transcription factor subunit B signature 197 220 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 PRINTS CCAAT-binding transcription factor subunit B signature 166 188 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 ProSiteProfiles NF-YA/HAP2 family profile. 163 223 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 SMART cbf3 162 223 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 44 280 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 166 220 IPR001289 GO:0003700|GO:0006355
Eupl01g00757 330 MobiDBLite consensus disorder prediction 60 80 - -
Eupl01g00757 330 MobiDBLite consensus disorder prediction 47 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00757 Eupl-Chr1 25484485 25495944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00757 24 326 CCAAT-HAP2 Transcription Factor Family AT3G05690 37.888 9.06e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Eupl01g00757 CBFB_NFYA 3.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00757 K08064 - nnu:104601425 417.542