Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00742 ATGTCACTCGACGTTGCATCTGAACACGTTTGCTACGTTCACTGCAACTACTGCAACACCATTTTAGCGGTTAGTGTTCCATGCAACAGTTTGTTCAATGTGGTTACTGTTCGATGCGGACATTGTGCTAATTTGCTGTCTGTGAATATGGGAGCTTTGCTACAAACACTCCCCCTTCAAGATATCCAGTTGCAGAATCACAACCAAAGCTCTGATGATTCCAGTAAGGATTGTGGGTCTTCTTCCAAAGACAGCAACGTTTCGGTGTTGGACTCTCCAGAGAATGAAGAACCTCGAATGCTTCCTATACGCCCCCCAGAGAAGAGGCATCGCGTTCCTTCGGCGTATAACAGATTTATTAAGGAGGAAATCCAAAGGATAAAGGCTAGTAATCCTGACATTAGCCACAGGGAAGCTTTCAGCACTGCTGCGAAAAATGTAAGTATTATAGAAAAGATTACACAAATAATCACAATCCAGGTAATGTACCATGGAGAGATTAATGAATATATTAAAAAAAAAAAAGAAACAGAATAG 537 0.4134 MSLDVASEHVCYVHCNYCNTILAVSVPCNSLFNVVTVRCGHCANLLSVNMGALLQTLPLQDIQLQNHNQSSDDSSKDCGSSSKDSNVSVLDSPENEEPRMLPIRPPEKRHRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNVSIIEKITQIITIQVMYHGEINEYIKKKKETE* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00742 178 PANTHER PROTEIN YABBY 6-RELATED 5 155 IPR006780 GO:0007275
Eupl01g00742 178 SUPERFAMILY HMG-box 101 144 IPR036910 -
Eupl01g00742 178 MobiDBLite consensus disorder prediction 97 112 - -
Eupl01g00742 178 MobiDBLite consensus disorder prediction 66 92 - -
Eupl01g00742 178 CDD HMG-box_SF 111 145 - -
Eupl01g00742 178 MobiDBLite consensus disorder prediction 66 112 - -
Eupl01g00742 178 Pfam YABBY protein 6 148 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00742 Eupl-Chr1 25254840 25261127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00742 1 153 C2C2-YABBY Transcription Factor Family AT1G08465 61.783 6.26e-62 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Eupl01g00742 YABBY 1.1e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00742 K25796 - nnu:104590803 249.98