Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00732 ATGTTCAACGGTATGATGGATCCTGAATTGATTAAGTTAGCTCAAGAACAGATGAGTAGACTTTCCCCAAGTGAATTGGCCAAGATCCAACAACAGATGATGTCCAATCCTGAGCTGATAAAAATGGCCTCAGAAAACATGAAGAACATAAGGCCTGAAGACTTGAAAAATGCTGCAGAGCAGCTTAAGTATGCCCGTACTGAGGATATGGTTCAGATCAGTGAGAAGATTGCTAATGCCACACCTGAAGAGATTGCTTCAATGAATGTCCGTGCTGATGCCCAGATCAAATACGAATTGAATGCAGCTCAGATGCTGAAGAAACAGGGGAATGAACTTCATAACCAGGGAAGGTTCAGTGATGCTGCACAGAAGTATTTACTCGCAAAGAATAACCTGAAGGGCATACCGATCTCCAAAGGCAAAACACTCCAGTTGACGTGTTCTCTCAATTTGATGTCCTGTTATTTGAAAACAAGGCAATATAATGAGTGCATTAAAGAAGGCTCGGAGGTCTTGGCATATGATGCAGAAAATGTCAAAGCTCTTTATCGGAGGGGTCAAGCATATAAAGAGTTAGGATTGCTAGAAGATGCAGTTTCCGACTTGAGTAAGGCACATGCAGTTTCCTCTGACGATGAAACTATTTCAGATGTCTTAAGGGATACAAATGAAAGATTGTTGAAAGAAGGTGGAGGGCAGCGTGCATCAGGACGATTGATAATCGAAGAGATAACTGAAGAAGAGGTCCGGACAGGGCCACCCAAAAGCAATAAAAGTTCTTCGTCTACTGAATATTCTGTGACACAACCACAGGAAGCTGGCAAATGCCCTGAGAGTGAAACTGGGACCAATGTTGGGGGTCCGACTTCTGATGCTGAGTGTTTTCAGGGTTTGAAAGACAACCCAGAAACCATCAGGTCATTCCAAAATTTCATTTCAAAAGCTGATTCTGACACTCTGGCTGCTTTGAGTGCTGGAAGTGCTGGAGGAGTGCCGCCTGATATGATTAAGACCGCCTCGAATATGATCAGCAAGATGTCTCCGGAAGAGCTCCAGAAAATGATCCAAATGGCCTCCTCTTTTCAAGGGAATAATCCATATTTTTCGCCGGGGACCATAGAAACTAATGGCCTCAGTTCAATATCCGGATCACTGCCACAGGGTGTGCCACCTGACATGCTTAAGACTGCATCTGATATGATGAGCAAGATGTCACCCGAAGAGCTTCAGAAAATGTTTGAAGTTGCCTCTTCTTTGAAGGGGAATGACTCAGTTTCAACAGCAACAGCAATGAATGCCAATGGCCTGGGATCAAATAATAGGTCGAAACATTCAGAAGCAACTGGAAGTCCTGCTGTAAACAGGAATACTGATGTGGGTGAAAGTAGTTCTTCTCGTGATTTGTTCTCAAATTTTAGAGCAGACCCATCTCCTCCGTCAAACATCCCAACCTCAATGGCTGATTTGCAAGAACAGATGCGAAACCAAATGAAAGATCCGGCAATGCAGCAGATGTTTACATCCATGATTAAGAATATGAGCCCAGACATGATGGCAAACATGAGCGAACAATTCGGAGTCAAGCTCTCACGGGAGCAGGCGGAAAAAGCTCAACAAGCTATGTCCTCAGTATCTCCGGATGACTTGGACAGAATGATGCGGTGGGCGGATAGGATACAAAGAGGAGTAGAAGGTGCAAAGAAGACAAAGAACTGGCTCCTGGGGAGACCTGGTATGATTCTTGCAATAGGCATGCTCATCTTAGCCATCATTCTTCACCGGCTGGGCTACATTGGCAGTTAG 1806 0.4446 MFNGMMDPELIKLAQEQMSRLSPSELAKIQQQMMSNPELIKMASENMKNIRPEDLKNAAEQLKYARTEDMVQISEKIANATPEEIASMNVRADAQIKYELNAAQMLKKQGNELHNQGRFSDAAQKYLLAKNNLKGIPISKGKTLQLTCSLNLMSCYLKTRQYNECIKEGSEVLAYDAENVKALYRRGQAYKELGLLEDAVSDLSKAHAVSSDDETISDVLRDTNERLLKEGGGQRASGRLIIEEITEEEVRTGPPKSNKSSSSTEYSVTQPQEAGKCPESETGTNVGGPTSDAECFQGLKDNPETIRSFQNFISKADSDTLAALSAGSAGGVPPDMIKTASNMISKMSPEELQKMIQMASSFQGNNPYFSPGTIETNGLSSISGSLPQGVPPDMLKTASDMMSKMSPEELQKMFEVASSLKGNDSVSTATAMNANGLGSNNRSKHSEATGSPAVNRNTDVGESSSSRDLFSNFRADPSPPSNIPTSMADLQEQMRNQMKDPAMQQMFTSMIKNMSPDMMANMSEQFGVKLSREQAEKAQQAMSSVSPDDLDRMMRWADRIQRGVEGAKKTKNWLLGRPGMILAIGMLILAIILHRLGYIGS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00732 601 ProSiteProfiles TPR repeat profile. 180 213 IPR019734 GO:0005515
Eupl01g00732 601 SUPERFAMILY TPR-like 96 218 IPR011990 GO:0005515
Eupl01g00732 601 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 4 387 - -
Eupl01g00732 601 SMART tpr_5 103 136 IPR019734 GO:0005515
Eupl01g00732 601 SMART tpr_5 146 179 IPR019734 GO:0005515
Eupl01g00732 601 SMART tpr_5 180 213 IPR019734 GO:0005515
Eupl01g00732 601 MobiDBLite consensus disorder prediction 255 291 - -
Eupl01g00732 601 MobiDBLite consensus disorder prediction 427 486 - -
Eupl01g00732 601 MobiDBLite consensus disorder prediction 238 298 - -
Eupl01g00732 601 Gene3D Tetratricopeptide repeat domain 90 234 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00732 Eupl-Chr1 25082947 25091794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00732 100 227 Calmodulin-binding Proteins AT5G48570 31.343 5.72e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00732 - - tss:122643419 827.78