Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00728 ATGGGGAACACATGTGTAGGACCGAATCTGGGGAAGCATGGATTCTTACAAACCATTTCGGCTGCAGTTTGGAGGACCCAGGGGACTGAGGATATGCTTCCCCCTCCCAATGGAGAGGCAAACAACAACAATGCAGGGGGTGCCACCCCTGCTGCTGTCCCTAAGGCATCCAAAGCTCCCCTGTCTGTCCAAAGTACACCTCCAGAACCAGTTAAAATCAGTGGAGAGGAGCCTAAACCAGCGGAATCTACAAAACCCATCAAACCGGATTTAACAGAAGGGAAAAGTAAACCAGTGGAGCCCGTGAAGGCAAAGAAGCCTCAATATATCAAGAGAGTGTCGAGTGCAGGCCTTAAGCTGGATTCTGTGTTAAAGAGGAAGACCGAGAACCTTAAGGAAATCTATAGTTTGGGGCGGAAGCTCGGACAAGGGCAATTTGGTATGACTTTTCTCTGTGTGGAGAAAGCAGCTGGCAAAGAGTACGCTTGCAAATCGATTGCAAAGAGGAAACTGACATCCGAAGAGGATGTAGAGGATGTTAGGAGAGAAATTCAGATAATGCACCACTTGGCGGGCCATCCCAACGTTATCTCGATCATGGGTGCTTATGAGGATGCTGTTGCAGTTCATGTTGTTATGGAATTGTGTGCAGGCGGGGAGCTTTTTGACAGGATTATTCAGAGGGGTCATTATACAGAAAGAAAGGCAGCTGAGCTTGCGAGGACTATAGTTGGTGTAGTGGAAGCCTGCCATTCTTTAGGTGTTATGCATCGAGACCTGAAGCCTGAGAATTTTCTCTTTGTCAACCAGGGAGAGGAGTCACCACTCAAAACAATTGACTTTGGGCTGTCAGTATTTTTTAGGCCAGGGGAAACATTCACTGATGTGGTTGGGAGTCCTTATTATGTTGCCCCAGAAGTGTTGCAAAAACATTATGGTCCAGAATGTGATGTTTGGAGTGCAGGGGTACTAATATATATTTTACTCAGTGGGGTTCCTCCATTTTGGGATGAAACCGAGCAAGGGATATTTGAACAGGTTTTAAAAGGTGAGCTTGACTTTATATCAGATCCATGGCCTAGTATCTCTGATAGTGCAAAAGATATGGTAAGGAAAATGCTTGTAAGAGACCCTAAAAAGCGCATGACAGCCCATGAAGTTCTCTGCCACCCTTGGGTTCAGGTTGATGGTGTAGCTCCTGATAAGCCTCTTGACTCTGCAGTTCTTACTCGGTTGAAGCAATTCTCTGCCATGAACAAGCTCAAGAAAATTGCAATCAGAGTCATTGCTGAACACCTGTCTGAAGAGGAAATTGCTGGCCTAAAAGAAATGTTTAAGATGATAGACACGGATAATAGTGGACACATCACTTTCGAAGAACTGAAGGCTGGTTTGGAAAGAGTTGGTGCTAATCTCAAGGAGTCTGAAATTTATGCATTAATGCAAGCGGCAGATGTTGACAATAGTGGTACCTTAGAGTACGGCGAGTTCTTAGCTGCAACTCTCCATCTAAACAAAATCGAGAGGGAGGACCATTTGTATGCAGCCTTCTCGTACTTCGACAAAGATGGAAGTGGGTACATCACCCAAGATGAGCTCCAACAGGCTTGTGAAGAGTTTGGTATAGAAGACGTCCGCCTGGAAGAAATGATGCGAGAAGCAGATCAGGACAATGATGGGCGCATAGATTACAGCGAGTTTCTGGCGATGATGCTAGATGGAGGTTTCGGCAAGAATGGTTTGCAAAATAATTTTTGCAAGAATGATCCGCAAAAGAATTTTAGCATTGGTTTCAGGGAGGCGTTAAAGCTTGGTTGA 1818 0.4538 MGNTCVGPNLGKHGFLQTISAAVWRTQGTEDMLPPPNGEANNNNAGGATPAAVPKASKAPLSVQSTPPEPVKISGEEPKPAESTKPIKPDLTEGKSKPVEPVKAKKPQYIKRVSSAGLKLDSVLKRKTENLKEIYSLGRKLGQGQFGMTFLCVEKAAGKEYACKSIAKRKLTSEEDVEDVRREIQIMHHLAGHPNVISIMGAYEDAVAVHVVMELCAGGELFDRIIQRGHYTERKAAELARTIVGVVEACHSLGVMHRDLKPENFLFVNQGEESPLKTIDFGLSVFFRPGETFTDVVGSPYYVAPEVLQKHYGPECDVWSAGVLIYILLSGVPPFWDETEQGIFEQVLKGELDFISDPWPSISDSAKDMVRKMLVRDPKKRMTAHEVLCHPWVQVDGVAPDKPLDSAVLTRLKQFSAMNKLKKIAIRVIAEHLSEEEIAGLKEMFKMIDTDNSGHITFEELKAGLERVGANLKESEIYALMQAADVDNSGTLEYGEFLAATLHLNKIEREDHLYAAFSYFDKDGSGYITQDELQQACEEFGIEDVRLEEMMREADQDNDGRIDYSEFLAMMLDGGFGKNGLQNNFCKNDPQKNFSIGFREALKLG* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00728 605 ProSitePatterns EF-hand calcium-binding domain. 485 497 IPR018247 -
Eupl01g00728 605 FunFam Calcium-dependent protein kinase SK5 221 405 - -
Eupl01g00728 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Eupl01g00728 605 PANTHER SERINE/THREONINE-PROTEIN KINASE 125 567 - -
Eupl01g00728 605 FunFam Calcium-dependent protein kinase 1 401 575 - -
Eupl01g00728 605 ProSiteProfiles EF-hand calcium-binding domain profile. 472 507 IPR002048 GO:0005509
Eupl01g00728 605 ProSitePatterns Protein kinases ATP-binding region signature. 141 168 IPR017441 GO:0005524
Eupl01g00728 605 SUPERFAMILY EF-hand 422 573 IPR011992 -
Eupl01g00728 605 Gene3D - 418 573 - -
Eupl01g00728 605 FunFam Calcium-dependent protein kinase 1 137 220 - -
Eupl01g00728 605 CDD EFh 515 571 IPR002048 GO:0005509
Eupl01g00728 605 SMART serkin_6 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00728 605 ProSiteProfiles EF-hand calcium-binding domain profile. 436 471 IPR002048 GO:0005509
Eupl01g00728 605 Gene3D Transferase(Phosphotransferase) domain 1 221 417 - -
Eupl01g00728 605 Gene3D Phosphorylase Kinase; domain 1 137 220 - -
Eupl01g00728 605 MobiDBLite consensus disorder prediction 28 105 - -
Eupl01g00728 605 MobiDBLite consensus disorder prediction 75 105 - -
Eupl01g00728 605 CDD STKc_CAMK 135 392 - -
Eupl01g00728 605 ProSitePatterns EF-hand calcium-binding domain. 449 461 IPR018247 -
Eupl01g00728 605 ProSiteProfiles EF-hand calcium-binding domain profile. 508 543 IPR002048 GO:0005509
Eupl01g00728 605 ProSitePatterns EF-hand calcium-binding domain. 521 533 IPR018247 -
Eupl01g00728 605 SMART efh_1 440 468 IPR002048 GO:0005509
Eupl01g00728 605 SMART efh_1 476 504 IPR002048 GO:0005509
Eupl01g00728 605 SMART efh_1 546 574 IPR002048 GO:0005509
Eupl01g00728 605 SMART efh_1 512 540 IPR002048 GO:0005509
Eupl01g00728 605 ProSiteProfiles EF-hand calcium-binding domain profile. 546 577 IPR002048 GO:0005509
Eupl01g00728 605 ProSitePatterns EF-hand calcium-binding domain. 555 567 IPR018247 -
Eupl01g00728 605 SUPERFAMILY Protein kinase-like (PK-like) 135 394 IPR011009 -
Eupl01g00728 605 Pfam Protein kinase domain 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00728 605 Pfam EF-hand domain pair 441 501 IPR002048 GO:0005509
Eupl01g00728 605 Pfam EF-hand domain pair 511 571 IPR002048 GO:0005509
Eupl01g00728 605 ProSiteProfiles Protein kinase domain profile. 135 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00728 Eupl-Chr1 25024000 25046431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00728 1 582 EF-hand Containing Proteins AT2G38910 73.266 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Eupl01g00728 Pkinase 1.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00728 K13412 - mof:131158172 963.37