Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00724 ATGGGGGATTCCGATTGCCGGAAAATCCGGAACATTTGTATTCTCGCCCACGTCGATCATGGCAAGACTACACTCGCTGACCATTTAATTGCTGGCTCCGCTGGTGGGTTACTCCACCCGAAGCAAGCTGGCCGACTGAGATTTATGGATTATCTTGATGAAGAGCAGAGGCGGGCAATAACAATGAAGAGCTCTTCGATTGCTCTGCAGTATAAGGAGTACGCTATTAATCTCATAGATTCTCCTGGTCATATGGACTTCTGCAGTGAGGTCTCGACTGCTGCCCGGTTGAGTGATGGGGCCTTGATCTTGGTTGATGCTGTTGAGGGGGTCCACATACAGACTCATGCGGTCCTGCGTCAGGCGTGGATAGAGAAGCTCACGCCTTGTTTGGTTCTGAACAAGATTGATCGGTTGATCTCAGAACTGAAACTGAGTCCAATGGAAGCTTATAATCGATTGCAAAGGATCGTTCACGAGGTTAATGGGATTGTGAGTGCGTACAAGTCAGAGAAATATCTCACGGATGTTGATTCGATACTTGCAGCACTTGGAAGTGAGATTGGTGATGAGAATCATGAGTTCGTGGAGGAAGATGACGAAGATACTTTCCAACCCCAGAAGGGAAATGTGGCTTTTGTTTGTGCTTTGGATGGGTGGGGTTTTTCTATTAGCGAGTTTGCTGATTTCTACGCTTCGAAGCTTGGGGCTAGTGCAGCAGCGTTGCAAAAGGCGTTGTGGGGCCCTCGATATTTTAACCCAAAGACCAAGATGATTGTGGGAAAGAAGGCAATCAGCGGAGGGAGTAAAGCTCGGCCCATGTTCGTGCAGTTTGTGCTTGAGCCACTCTGGCAGGTTTATCAGGCTGCTCTCGAATCTGATGGGGATAAAGGGGTGCTTGAGAAAGTCATCAAGTCATTCAACTTGTCTGTACCTGCTCGAGAACTTCAGAACAAGGATTCGAAAGTTGTGCTTCAAGCTATCATGAGCCGTTGGCTTCCTTTGTCGGATGCAATCTTGACAATGGTGGTTAAGTGTATGCCGGATCCCATTGGGGCTCAGTCTATTCGAGTCTCGCGGTTGCTTCCAAAGAGAGAGGTTGTGAATAGTGCGGTTAGCTCCGATGTGCTTGCAGAGGTGGAGCATGTGAGGAAATCTGTTGAGGCTTGTAGCTCTGGCCCCGAAGCACCGTGTGTTGCTTTTGTGTCTAAGATGTTTGCCGTCCCATTGAAAATGCTCCCCCAGAGGGGTCCCAGTGGGGAAGTTGTGAACAATTTCATGGAAGAAGGTGGGGTTGGTGAATCAGATGAGTGCTTCCTTGCATTTGCAAGGATTTTCAGTGGATCTCTTTCTTCAGGGCAGAGGATCTTTGTGCTTTCAGCTTTATATGATCCGTTGAAAGGAGAATCAATGCAAAAACATGTGCAGGAAGCCAAATTGCATTCATTGTATCTGATGATGGGGCAAGGTTTGAAACCAGTGGCCTCTGCTAGGGCGGGGAATGTTGTGGCAATACGTGGCCTTGGCCAGCATATCTTGAAGACCGCTACTCTTTCATCCACAAAAAACTGTTGGCCATTCTCAAGTATGGTGTTCCAAGTTTCCCCTACACTGAGAGTGGCAATCGAACCATCTGATCCAGTGGATATGGGTGCGCTTATGAGGGGCTTGAGACTTCTGAACCGGGCAGACCCATTTGTAGAGGTTACTGTTTCTGCCAGAGGGGAACAGGTGCTTGCAGCTGCAGGAGAGGTTCATCTTGAGAGATGCATAAAAGATTTGAAAGAGAGATTTGCAAGGGTAAGCTTGGAAGTCTCAGCCCCCCTTGTCTCTTATAGAGAGACCATTGAGGGCGAGGGATCCAATCCACTAGAGAACATGAAGATGTTGATGGGGAGCTTGGATTGTATTGAGAAGACAACTCCCAATGGAAGATGTCGTGTTCGAGTGCATGTCATGAAGCTTCCGCCTGCACTAACGAAGGTGCTTGATGAAAGTTCTGATCTACTTGGAGATATTATAGGAGGCAAGCCAGGACTGAGAAACAAGAGCTTGGAAACACTGAGAGAAAAGAGTACTGTTGAAGATGACAATCCAATTGAAGCCCTTCAGAAACGCATAGTGGATGCTATAGAGAGTGCTATTGAGTCTGGCAGTAAAGAAATCGACACCGAGAAATATAAAAATTTGTGGCTTCAGTTTCTTCAGAGGATTTGGGCACTCGGGCCTAGGCAGGTTGGTCCTAACATCCTCCTTGCTCCAGATCCCCAAGGAGGGGATAGTGATTGTTCTATTCTTATACGGGGTTCTTCTCATGTATCTGAAAGATTGGGGTTCGTGGATGTATCTGGTACAAAGACTAGAGACAAAAACACAGCCGCTGAGGAATCTTTAGGAGCAACCCGCTCACTGTACGTGGAGGCAGAGAGTCTTGAGAGCAGTGTGGTATCTGGGTTCCAACTAGCTACAGCAGCTGGACCACTGTGTGAAGAACCAATGTGGGGATTGGCATTTCTTGTTGAAGCTTGTATTATTCCATTGGGGGCTGGGTCTGATGAATCTGAACCTTCTACCCAACTACCAGATCAATATGGCATCTTCACAGGACAGGTTATGACAGCTGTGAAGGAGGCGTGTAGGGCAGCCTTGCTTCATAAGAAACCTCGACTTGTGGAAGCCATGTACTTCTGTGAGTTGAACACCCCAACTGAATACTTGGGCCCCATGTATGCTGTACTTTCTAGGCGGAGGGCCCGAGTCTTGAAGGAAGAGATGCAGGAAGGGTCTGCATTGTTCACTGTGCATGCTTATGTGCCAGTTGCTGAAAGCTTTGGTTTTGCAGATGAGCTTAGGAGATGGACGTCAGGAGCTTCAAGTGCTCTACTTGTGCTTAGCCATTGGGAAGCACATTCAGAGGATCCTTTCTTTGTACCCAAAACAGATGATGAGATTGAAGAGTTTGGAGACGGTTCTAATGTTCTGCCAAACACAGCAAGGAAGCTTATTGATGCTGTTAGGCGGCGGAAAGGCCTTCCAGTTGAGGAAAAAGTTGTCCAGCATGCCACAAAGCAAAGGACCCTTGCCCGTAAAGTGTGA 3096 0.4771 MGDSDCRKIRNICILAHVDHGKTTLADHLIAGSAGGLLHPKQAGRLRFMDYLDEEQRRAITMKSSSIALQYKEYAINLIDSPGHMDFCSEVSTAARLSDGALILVDAVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLISELKLSPMEAYNRLQRIVHEVNGIVSAYKSEKYLTDVDSILAALGSEIGDENHEFVEEDDEDTFQPQKGNVAFVCALDGWGFSISEFADFYASKLGASAAALQKALWGPRYFNPKTKMIVGKKAISGGSKARPMFVQFVLEPLWQVYQAALESDGDKGVLEKVIKSFNLSVPARELQNKDSKVVLQAIMSRWLPLSDAILTMVVKCMPDPIGAQSIRVSRLLPKREVVNSAVSSDVLAEVEHVRKSVEACSSGPEAPCVAFVSKMFAVPLKMLPQRGPSGEVVNNFMEEGGVGESDECFLAFARIFSGSLSSGQRIFVLSALYDPLKGESMQKHVQEAKLHSLYLMMGQGLKPVASARAGNVVAIRGLGQHILKTATLSSTKNCWPFSSMVFQVSPTLRVAIEPSDPVDMGALMRGLRLLNRADPFVEVTVSARGEQVLAAAGEVHLERCIKDLKERFARVSLEVSAPLVSYRETIEGEGSNPLENMKMLMGSLDCIEKTTPNGRCRVRVHVMKLPPALTKVLDESSDLLGDIIGGKPGLRNKSLETLREKSTVEDDNPIEALQKRIVDAIESAIESGSKEIDTEKYKNLWLQFLQRIWALGPRQVGPNILLAPDPQGGDSDCSILIRGSSHVSERLGFVDVSGTKTRDKNTAAEESLGATRSLYVEAESLESSVVSGFQLATAAGPLCEEPMWGLAFLVEACIIPLGAGSDESEPSTQLPDQYGIFTGQVMTAVKEACRAALLHKKPRLVEAMYFCELNTPTEYLGPMYAVLSRRRARVLKEEMQEGSALFTVHAYVPVAESFGFADELRRWTSGASSALLVLSHWEAHSEDPFFVPKTDDEIEEFGDGSNVLPNTARKLIDAVRRRKGLPVEEKVVQHATKQRTLARKV* 1032
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00724 1031 NCBIfam small GTP-binding protein domain 8 140 IPR005225 GO:0005525
Eupl01g00724 1031 Pfam Elongation factor G C-terminus 890 973 IPR000640 -
Eupl01g00724 1031 CDD EF2_II 397 521 - -
Eupl01g00724 1031 SMART EFG_C_a 889 978 IPR000640 -
Eupl01g00724 1031 Gene3D Translation factors 350 533 - -
Eupl01g00724 1031 CDD aeEF2_snRNP_like_IV 608 896 - -
Eupl01g00724 1031 CDD eEF2_snRNP_like_C 892 968 - -
Eupl01g00724 1031 Gene3D - 633 886 IPR014721 -
Eupl01g00724 1031 SUPERFAMILY Ribosomal protein S5 domain 2-like 610 891 IPR020568 -
Eupl01g00724 1031 FunFam Translation elongation factor 2 535 611 - -
Eupl01g00724 1031 SUPERFAMILY EF-G C-terminal domain-like 533 608 IPR035647 -
Eupl01g00724 1031 SUPERFAMILY Translation proteins 393 530 IPR009000 -
Eupl01g00724 1031 Gene3D - 888 1023 - -
Eupl01g00724 1031 Gene3D - 3 210 IPR027417 -
Eupl01g00724 1031 FunFam Elongation factor 2-like protein 1 212 - -
Eupl01g00724 1031 Pfam Elongation factor Tu domain 2 440 518 IPR004161 GO:0005525
Eupl01g00724 1031 CDD EF2 10 232 - -
Eupl01g00724 1031 PRINTS GTP-binding elongation factor signature 11 24 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 PRINTS GTP-binding elongation factor signature 57 65 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 PRINTS GTP-binding elongation factor signature 77 87 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 PRINTS GTP-binding elongation factor signature 93 104 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 PRINTS GTP-binding elongation factor signature 129 138 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 7 240 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 SUPERFAMILY EF-G C-terminal domain-like 892 991 IPR035647 -
Eupl01g00724 1031 Gene3D Yeast translation eEF2 (G' domain) 224 333 - -
Eupl01g00724 1031 FunFam Elongation factor like GTPase 1 224 333 - -
Eupl01g00724 1031 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 348 IPR027417 -
Eupl01g00724 1031 FunFam Elongation factor like GTPase 1 888 1023 - -
Eupl01g00724 1031 CDD EF2_snRNP_III 536 606 - -
Eupl01g00724 1031 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 7 1030 - -
Eupl01g00724 1031 Pfam Elongation factor Tu GTP binding domain 8 343 IPR000795 GO:0003924|GO:0005525
Eupl01g00724 1031 Gene3D Elongation Factor G (Translational Gtpase), domain 3 535 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00724 Eupl-Chr1 24970617 24974565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00724 1 1031 Eukaryotic Initiation Factors Gene Family AT3G22980 72.120 0.0 1504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00724 K14536 - ming:122094035 1701.41