Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00691 ATGGACGTACAACAACGTGACGATATGCCCGATAAGTCCGATAAGCCGTCGTGCGACAGTCGGCATGTCAGGACAGGGAAGCGTGCTACATCACTAGCAACAACGGTGGTGTCGCCTATGGTACCTTGTGGGGCATGCAAATTCTTGAGGAGGAAGTGCATAAGCGGGTGTATCTTTGCACCATACTTCAGGTCAGACCAGGGTGCCGCTAAGTTCGCTGCGGTTCATAAGGTGTTCGGTGCGAGTAATGTGTCGAAGCTGTTGTTACACATACCGGGAAATCGACGGCAGGATGCGATAATTACGATAACTTATGAGGCTCAGGCTAGGCTGTCTGATCCAGTTTATGGTTGTGTGTCTACCATACTTGCTTTGCAACAACAGGTTGCGTCATTGCAAGCCGAGCTCTCGATCGTGCAAATGCAGCTAATAAACAGTAGGTTGGCAGTTGCAAACGCCCTCCAAAGGTCGCAGCAGCAGATGCAGCAACAACAAATTGCAATGCTGCAGCCTGCGTACTCAAACAATTCGTCAGCTTCGAACAACCTTGTCAACCTGAGCAGCTTCGCATCAGACATCGATCTCACAGCAGACAGAACCCCGACATCTCGGAGCTTCGAGCCCCTTCAACTCTCGCAAGCATTGCAGGATGAGGAGGAAGGTGAGGAGCAGAGCCAGAATCCGGTCATTTTCACCAATCAGATAATTCATAGGAAATAA 720 0.5014 MDVQQRDDMPDKSDKPSCDSRHVRTGKRATSLATTVVSPMVPCGACKFLRRKCISGCIFAPYFRSDQGAAKFAAVHKVFGASNVSKLLLHIPGNRRQDAIITITYEAQARLSDPVYGCVSTILALQQQVASLQAELSIVQMQLINSRLAVANALQRSQQQMQQQQIAMLQPAYSNNSSASNNLVNLSSFASDIDLTADRTPTSRSFEPLQLSQALQDEEEGEEQSQNPVIFTNQIIHRK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00691 239 PANTHER LOB DOMAIN CONTAINING PROTEIN 41 219 - -
Eupl01g00691 239 MobiDBLite consensus disorder prediction 215 239 - -
Eupl01g00691 239 Coils Coil 122 142 - -
Eupl01g00691 239 Pfam Lateral organ boundaries (LOB) domain 42 140 IPR004883 -
Eupl01g00691 239 ProSiteProfiles LOB domain profile. 41 143 IPR004883 -
Eupl01g00691 239 MobiDBLite consensus disorder prediction 225 239 - -
Eupl01g00691 239 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00691 Eupl-Chr1 24352754 24354590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00691 42 239 AS2 family AT3G03760 59.471 1.62e-74 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Eupl01g00691 LOB 2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00691 - - vri:117921175 295.049