Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00681 ATGGCAAGGCTGACATCCATATCCCAAGGCAGGAAACTCTATCTCCTCCTCAACACATCCTTTCTCTTTCTCCTCTCTTTCTACCTTACCACCCATCTCTATCCCTCCAATTCCCATTTCCTCCATCAATCCAATTCTCAGATCCTCCATGAATCATCCAAAGATGATAGTTGCAGCAACCTTAATAGTTACCGTGGTTATAAAGCTAAGTGTGCATATGTGAGGTCTGAGAAGAGATGCCTGTCTGGAGGCTACATAGATTATCTCCTCCTCTTCTATTGCACCTGCGGCCGATACCCGGTTTTCGGATACAGCCTACTTATCCTATGGCTTGTTTTACTCTTCTATCTCTTAGGTAACACAGCTGCCAATTACTTCTGTTCTTCCTTAGAGGGCTTGTCTAGAATCTTGAAGCTTTCTCCGACCATCGCCGGTGTCACCCTCCTCTCTTTAGGCAATGGTGCGCCGGATGTCTTCGCTAGTATCGTCTCTTTCATGGGCACCGGTGCCCACGACGGTGCTGTCGGCCTTAACAGTATCTTGGGTGGGGCCTTCTTTGTATCTAGTATTGTTGTAGGAGTTATTAGCATTTGCATTAGTCGACATCGAATATCCGTCGATAAGTCCAGCTTCATAAGAGATGTTCTCTTCTTCCTTGTCTCTATTTCTTCTCTACTTTTGATCTTGATCATAGGGAAGATCAACTTGTGGGGATCATTGGCTTTTGTTTCTTTGTACTTTGTGTATGTATTCATTGTTTCCACCACACATTTCTGCAGGAAGAAAGATGGAGAGGTAAGTGATGATCTCTTTGCTGTTTCTCCTAAATTGCCTGTCACTAGGAGCTTCTTGTTATATGAACCTGAAGAATTCGGCGAATTGAGTACGCCTTTATTGGGCTATGTTGGCGATGAAAAGCCCATTTCAATGGAGAATGGTGGTCTTGAAGGTTGTGAAGATCAGAAAGCAAGAACAAGATGTTTTGATCTTGATTCATCAATTTGTTACTACTTTGGTAGGTTTCTGTACATTTTAGAGCTGCCCCTTTACCTACCAAGGAGAATGACTATTCCTGTTGTTTGCGAGGAGAAATGGTCTAAGCCATTTGCAGTTGCTTCAGCTATATTAGCACCAGTTCTCTTGGCAGCCCTTTGGAACTCTCAAAGGGGTAATTTGGGTTCCATAACAAGCTCAGTGATCTATGTAATTGGTGGATTGGCAGGGATTGTTTTGGGGATTCTTGCATTTGTGACTACTGAGAAGTCTTACCCACCAAAAAGATGCTTATTCCCATGGCTTGCAGGAGGGTTTTTGATGAGTGTCACTTGGACTTATATCATAGCTCAAGAATTGGTTGCTTTGCTAGTTTCACTTGGGAATATATTTGGGATCAGCCCTTCAATTCTAGGACTGACTCTGCTTGCTTGGGGCAATTCACTTGGAGATTTAATTGCCAATGTTGCAATGGCAATCAATGGTGGGCCAGAAGGGGCCCAGGTTGCGATTTCTGGCTGTTACGCGGGACCCATCTTCAACATAATAATGGGCTTGGGCTTGTCTTTTGTTATCTCATCTTGGTCTACATACCCATCTTGTTATGTCATCCCTACAGACTCTTCGCTTATGTGA 1629 0.4365 MARLTSISQGRKLYLLLNTSFLFLLSFYLTTHLYPSNSHFLHQSNSQILHESSKDDSCSNLNSYRGYKAKCAYVRSEKRCLSGGYIDYLLLFYCTCGRYPVFGYSLLILWLVLLFYLLGNTAANYFCSSLEGLSRILKLSPTIAGVTLLSLGNGAPDVFASIVSFMGTGAHDGAVGLNSILGGAFFVSSIVVGVISICISRHRISVDKSSFIRDVLFFLVSISSLLLILIIGKINLWGSLAFVSLYFVYVFIVSTTHFCRKKDGEVSDDLFAVSPKLPVTRSFLLYEPEEFGELSTPLLGYVGDEKPISMENGGLEGCEDQKARTRCFDLDSSICYYFGRFLYILELPLYLPRRMTIPVVCEEKWSKPFAVASAILAPVLLAALWNSQRGNLGSITSSVIYVIGGLAGIVLGILAFVTTEKSYPPKRCLFPWLAGGFLMSVTWTYIIAQELVALLVSLGNIFGISPSILGLTLLAWGNSLGDLIANVAMAINGGPEGAQVAISGCYAGPIFNIIMGLGLSFVISSWSTYPSCYVIPTDSSLM* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00681 542 Pfam Sodium/calcium exchanger protein 109 253 IPR004837 GO:0016020|GO:0055085
Eupl01g00681 542 Pfam Sodium/calcium exchanger protein 433 530 IPR004837 GO:0016020|GO:0055085
Eupl01g00681 542 Gene3D - 139 275 IPR044880 -
Eupl01g00681 542 Gene3D - 373 541 IPR044880 -
Eupl01g00681 542 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 16 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00681 Eupl-Chr1 24128502 24130670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00681 54 542 Antiporters AT5G17860 51.215 4.68e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00681 K13754 - ming:122085938 657.136