Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00670 ATGGCACAAGAAAGCTGGAAAAATGAAACTGATGAGACCGAATGCCGAACTCCTGAAGGTCCAATCATGTGTGCAAACAATTGTGGCTTCTTCGGAAGTGCTGCCACGAACAATCTCTGCTCCAAGTGCCACCGAGATATCTTCATGAAACAGAAGCAGCAGCAGCAACTGAAGGCATCTCCAGTCGTTCCGGTTGCTGAAAAGATGCCTTCAGCATCAACTTTGCGACAATTTGAACCTGTTGTGGAAAGGCTGGATAAGGTGGCAGAAAGCCATGGTCTGAGTTCTGAAGGGGGGCCGTCATCAGAGGTGGTATGCGAGCAGCCACCAAACCGTTGCATGGCTTGTCGGAAACGGGTTGGTTTGACAGGGTTCAAGTGCCGTTGTGGGGGTACATTTTGTTCCATTCACCGGTACTCGGAGAAGCACGCGTGCTCGTTCGATTACAGGAGTGCTGGCCGGGATGCCATAGCCAAGGCAAACCCTGTTGTGAAGGCTGAGAAGATTGAGAAGATCTGA 519 0.5087 MAQESWKNETDETECRTPEGPIMCANNCGFFGSAATNNLCSKCHRDIFMKQKQQQQLKASPVVPVAEKMPSASTLRQFEPVVERLDKVAESHGLSSEGGPSSEVVCEQPPNRCMACRKRVGLTGFKCRCGGTFCSIHRYSEKHACSFDYRSAGRDAIAKANPVVKAEKIEKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00670 172 Gene3D - 89 168 IPR035896 -
Eupl01g00670 172 Gene3D - 7 70 - -
Eupl01g00670 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Eupl01g00670 172 ProSiteProfiles Zinc finger A20-type profile. 18 52 IPR002653 GO:0003677|GO:0008270
Eupl01g00670 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 19 172 - -
Eupl01g00670 172 SMART A20_3 21 45 IPR002653 GO:0003677|GO:0008270
Eupl01g00670 172 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Eupl01g00670 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Eupl01g00670 172 SUPERFAMILY AN1-like Zinc finger 104 167 IPR035896 -
Eupl01g00670 172 Pfam A20-like zinc finger 22 45 IPR002653 GO:0003677|GO:0008270
Eupl01g00670 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 23 62 - -
Eupl01g00670 172 FunFam Zinc finger AN1-type containing 6 89 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00670 Eupl-Chr1 23969964 23972253 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00670 11 172 C2H2 Transcription Factor Family AT3G52800 47.674 1.02e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00670 - - ming:122089927 270.396