Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00662 ATGGGGAATTGCTGGTGTAGGTGGAAACCTTCCATTTACAGAGTATCATCTAATGCAAAGTCAGAGTCTCCAAAAGACCAGTGTCCATCACTGAAAGAAGTGAAGGAACCTAGTAAATTACCTTCAAATCCTGAAGAAGTTGAGGACTTACGTCGGGACTCAGCGGCGAATCCCTTGATCGCATTTTCTTTCAGTGAGCTAAAGATAATTACAGGGAATTTTAGGCAAGATCATGTATTAGGTGGAGGAGGATTTGGAAGTGTTTATAAAGGGTTCATCTCTGAGGATTTAAGGGAAGGGCTTCAGCCTCTTGTAGTAGCTGTTAAGGTTCATGATGGGGATAACAGTTTTCAAGGCCACCGAGAATGGCTGGCCGAAGTTATATTTTTGGGCCAACTTTCCCATCCGAATCTTGTGAAACTGGTCGGATACTGCTGCGAAGACGAACATCGTGTACTGATATATGAGTATATGGCTCGGGGTAGTGTGGAAAACAATCTATTCTCAAGAGTATTACTTCCACTTCCTTGGTCTATCAGAATGAAGATTGCATTTGGTGCTGCGAAAGGACTTGCATTTCTCCACGAAGCTGAGAAACCAGTCATCTACCGTGATTTTAAGACATCTAATATTTTGCTGGACAACGACTATCATGCAAAACTTTCCGACTTTGGCCTTGCAAAAGATGGACCGGTGGGTGATGAATCTCATGTTTCTACTCGCATTATGGGAACATATGGATATGCAGCCCCTGAATATATAATGACAGGCCATCTGACTTCTAGGAGTGATGTTTACAGCTACGGCGTTGTTCTCCTCGAACTGCTAACAGGCAGAAAATCTTTAGACAAGTCCCGTCCTGCCCGAGAACAGAACCTCACTGATTGGGCCCTCCCTTTGCTCAGCGAGAAGAAGAAACTGCTTAACATTATTGACCCAAGATTGGAAGGAGATTATCCGGTCAAAGGTGTTCACAAGGCAGCTATGCTCGCTTATCATTGTCTAAACCGTAACCCAAAGGCGAGGCCGCTGATGAGAGATATTGTAGACTCTTTGGAGCCTCTTCAGGTCACTGTGGAGGTTCCATCTACAGATCCTACTTCGAATATGAACAATGGAGTCCCAGCTGTAGAGTCTCAACTAAAAGATCCTTGCTGTAAGTGA 1164 0.4416 MGNCWCRWKPSIYRVSSNAKSESPKDQCPSLKEVKEPSKLPSNPEEVEDLRRDSAANPLIAFSFSELKIITGNFRQDHVLGGGGFGSVYKGFISEDLREGLQPLVVAVKVHDGDNSFQGHREWLAEVIFLGQLSHPNLVKLVGYCCEDEHRVLIYEYMARGSVENNLFSRVLLPLPWSIRMKIAFGAAKGLAFLHEAEKPVIYRDFKTSNILLDNDYHAKLSDFGLAKDGPVGDESHVSTRIMGTYGYAAPEYIMTGHLTSRSDVYSYGVVLLELLTGRKSLDKSRPAREQNLTDWALPLLSEKKKLLNIIDPRLEGDYPVKGVHKAAMLAYHCLNRNPKARPLMRDIVDSLEPLQVTVEVPSTDPTSNMNNGVPAVESQLKDPCCK* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00662 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Eupl01g00662 387 Pfam Protein tyrosine and serine/threonine kinase 76 352 IPR001245 GO:0004672|GO:0006468
Eupl01g00662 387 FunFam Serine/threonine-protein kinase BIK1 41 157 - -
Eupl01g00662 387 PANTHER OS01G0588500 PROTEIN-RELATED 35 356 - -
Eupl01g00662 387 FunFam Probable serine/threonine-protein kinase PBL8 158 372 - -
Eupl01g00662 387 MobiDBLite consensus disorder prediction 16 49 - -
Eupl01g00662 387 ProSiteProfiles Protein kinase domain profile. 74 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00662 387 MobiDBLite consensus disorder prediction 26 49 - -
Eupl01g00662 387 MobiDBLite consensus disorder prediction 361 387 - -
Eupl01g00662 387 ProSitePatterns Protein kinases ATP-binding region signature. 80 109 IPR017441 GO:0005524
Eupl01g00662 387 Gene3D Transferase(Phosphotransferase) domain 1 158 372 - -
Eupl01g00662 387 SUPERFAMILY Protein kinase-like (PK-like) 50 352 IPR011009 -
Eupl01g00662 387 Gene3D Phosphorylase Kinase; domain 1 38 157 - -
Eupl01g00662 387 MobiDBLite consensus disorder prediction 361 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00662 Eupl-Chr1 23832803 23836806 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00662 41 352 Glycoside Hydrolase AT3G07070 49.379 1.27e-104 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Eupl01g00662 PK_Tyr_Ser-Thr 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00662 - - nnu:104611157 684.871