Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00659 ATGCCAGAGCTGCGAAGTGGAGCCCGGCAAGCTCGGTTAAGGTCCAAACGGCTTGATGATCTTCAGCCTTCTATCCAACCCTTTGATGAAGCAGAAAATTGGGTCCTTCCAACTCAGAACAGAACCGGAAGGAGAGTTGGTGCTGGAAGAGGAAGGGGTTGCAATGCCACAACAATAGCAAAAGGGCCTTCAGTGACACCAGCAAGGCCAGCCGCTGCTGGTAGAGGCAAGGACATTAGGCTAATAGAGTTAGACCCAGAGCATCCTCGTGAAATTCTTCCTGAAGCTGTTGTTGGAGGTGCAGAAGAACCTGCTTTTAATCAAGCAGAGGGGGTGGGAGATAAAGACTTAGTGATGGAGGGTGGGAGTGCGGAGAAAGTGATGGGTGTTGAAGAAGAAGCAGGCGCAACTCCAGTCCCTGAAAGTGTACAAGTAGGCAATTCCCCTGTATATAAGATAGAAAGGAAGTTGGGTAAGGGTGGTTTTGGTCAAGTTTACGTTGGCAGAAGGCTAACTGGTGGCACGGAGCGCACTGGACCAGATGCCTTTGAGGTGGCATTGAAGTTTGAACACCGTAGTAGTAAAGGTTGCAATTATGGTCCTCCTTACGAGTGGCAAGTCTACAACACTCTCAATGGATGTTATGGACTTCCATGGGTTCACCACAAGGGTCGCCAAGGAGATTATTACATTCTTGTCATGGACATGCTTGGGCCTAGTCTTTGGGATGTCTGGAATTCCGTTGGACAGGCGATGTCGCCGAATATGGTGGCCTGCATTGCTGTCGAGGCGATATCAATTCTTGAGAAACTTCACTTGAAGGGGTTTGTGCATGGAGATGTGAAGCCAGAGAATTTTCTACTTGGTCAACCCGGAACTGCTGATGAGAAGAAGCTATTTCTTGTCGACCTTGGTTTGGCATCTAGATGGAAGGACACGTCATCCGGTCAGCACGTTGACTATGACCAGAGGCCTGACATCTTCAGGGGAACAATAAGATATGCAAGTGCACACGCACATCTGGGTCGGACAGGAAGCAGAAGGGATGATCTTGAGTCACTGGCATACACATTGATATTTCTCATCAAGGGAAGGTTACCGTGGCAAGGCTATCAGGGGGACAACAAGAGTTTTCTTGTTTGTAAGAAAAAGATGGGTACTTCTCCAGAGTTGCTGTGTTGTTTTTGCCCTCCCCCATTTAAAGAGTTTCTTGAAATTGTGACCAACATGAAATTTGATGAAGAACCAAACTATCCCAAGCTTATTTCTCTATTTGAAAGCCTGATTGAACCATGCACACCATTGAGACCGATTAGAATTGATGGAGCTCTAAAGGTTGGTCAGAAGCGAGGAAGGTTGCTTGTAAATCTGGAAGAAGATGAGCAACCTAAGAAAAAAGTACGATTAGGAAGTCCAGCCACCCAGTGGATTTCGGTTTACAACGCACGTCGTCCTATGAAGCAGAGATACCACTATAATGTAGCAGATACAAGGCTTCATCAGCATGTAGATAAGGGTTATGAAGATGGTTTATATATCAGTTGTGTGGCTTCTCAAGCAAATCTTTGGGCCCTTATCATGGACGCAGGAACAGGATTTTGTTCCCAGGTCTACGAATTGTCGGCTGTCTTCCTACACAAGGATTGGATAATGGAACAGTGGGAAAAGAACTACTACATCAGTTCAATAGCTGGTGCAGCCAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACCCCTTACACCCAACAATCATACAAAGTTAGCGAATCATTTCCCTTCAAATGGATAAATAAAAAATGGAAAGAAGGTTTCCATGTCACATCCATGACTACTGCTGGCAGCCGCTGGGGTGTGGTAATGTCGAGGAATTCTGGTTATTCTTCCCAGGTTGTGGAGCTTGATTTTCTGTACCCAAGTGAAGGAATACACCGGCGATGGGAGAGTGGTTACAGGATAACCTCTACAGCTGCCACCCCTGATCAAGCCGCTTTCATATTGAGCATACCAAAGCGTAAACTGATGGATGAAACACAAGAAACTCTGCGTACTTCTGCCTTCCCAAGCACCCATGTAAAGGAAAAATGGTCCAAAAATCTGTACATTGCTTCGATTTGTTGTGGTCGGACTGTTTGTTGA 2139 0.4614 MPELRSGARQARLRSKRLDDLQPSIQPFDEAENWVLPTQNRTGRRVGAGRGRGCNATTIAKGPSVTPARPAAAGRGKDIRLIELDPEHPREILPEAVVGGAEEPAFNQAEGVGDKDLVMEGGSAEKVMGVEEEAGATPVPESVQVGNSPVYKIERKLGKGGFGQVYVGRRLTGGTERTGPDAFEVALKFEHRSSKGCNYGPPYEWQVYNTLNGCYGLPWVHHKGRQGDYYILVMDMLGPSLWDVWNSVGQAMSPNMVACIAVEAISILEKLHLKGFVHGDVKPENFLLGQPGTADEKKLFLVDLGLASRWKDTSSGQHVDYDQRPDIFRGTIRYASAHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVCKKKMGTSPELLCCFCPPPFKEFLEIVTNMKFDEEPNYPKLISLFESLIEPCTPLRPIRIDGALKVGQKRGRLLVNLEEDEQPKKKVRLGSPATQWISVYNARRPMKQRYHYNVADTRLHQHVDKGYEDGLYISCVASQANLWALIMDAGTGFCSQVYELSAVFLHKDWIMEQWEKNYYISSIAGAANGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNSGYSSQVVELDFLYPSEGIHRRWESGYRITSTAATPDQAAFILSIPKRKLMDETQETLRTSAFPSTHVKEKWSKNLYIASICCGRTVC* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00659 712 ProSitePatterns Protein kinases ATP-binding region signature. 157 188 IPR017441 GO:0005524
Eupl01g00659 712 PANTHER CASEIN KINASE-RELATED 143 680 - -
Eupl01g00659 712 Gene3D Transferase(Phosphotransferase) domain 1 123 467 - -
Eupl01g00659 712 FunFam Casein kinase 1-like protein 123 471 - -
Eupl01g00659 712 Pfam Protein kinase domain 151 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00659 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Eupl01g00659 712 SUPERFAMILY Protein kinase-like (PK-like) 151 439 IPR011009 -
Eupl01g00659 712 CDD STKc_CK1 151 425 - -
Eupl01g00659 712 SMART serkin_6 151 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl01g00659 712 MobiDBLite consensus disorder prediction 1 25 - -
Eupl01g00659 712 ProSiteProfiles Protein kinase domain profile. 151 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00659 Eupl-Chr1 23774245 23785458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00659 226 422 MAP Kinase Kinase Kinase Kinase AT1G53165 25.253 1.56e-07 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Eupl01g00659 Pkinase 2.9e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00659 - - ming:122091782 1311.98