Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00647 ATGGAAATTACAGAGAAGAAGGAGGGGGGCGAGGGTAAGGCTTTGATCTCTCAGTCAGACATATTTGTCGTCGATGCCGAGAAAGAAGCTGAAGATAGAGAACGACAAGCTCGCGAATTCAAAGCCGGTTTGCATCCATTGAAGCACAAGTTTGTATTTTGGTACACACGTCGAACCCCTGGAGTTCGGACACAAACATCATATGAGGACAATATCAAGAAAATTGTGGAGTTCAGTACGGTTGAAGGTTTCTGGGTGTGCTATTGCCATCTGGCTCGTCCTTCTTCTTTGCCAAGTCCAACAGACTTGCATCTTTTCAAAGAGGGTATTCGGCCTCTATGGGAGGATTCTGCTAATTGCAATGGTGGAAAGTGGATAATACGTTTCAAAAAGGCTGTCTCAGGTCGCTTTTGGGAAGACTTGGTTCTAGCATTAGTTGGTGACCAACTTGATTATGGAGACAATATATGTGGCGCTGTGCTGAGCATTCGTTTTAATGAGGACATATTGAGCGTCTGGAACCGCAATGCATCTGATCACCAGGCTGTGATGGCTTTAAGAGATGCAATCAAGCGACAACTGAAGCTTCCCCATAGCTATGTAATGGAATACAAGCCGCACGATGCTTCTCTGCGTGACAACTCATCATACAGGAACACATGGTTGAGAGGATAG 675 0.4533 MEITEKKEGGEGKALISQSDIFVVDAEKEAEDRERQAREFKAGLHPLKHKFVFWYTRRTPGVRTQTSYEDNIKKIVEFSTVEGFWVCYCHLARPSSLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKAVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDAIKRQLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00647 224 FunFam Eukaryotic translation initiation factor NCBP 18 217 - -
Eupl01g00647 224 Pfam Eukaryotic initiation factor 4E 46 204 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl01g00647 224 Gene3D RNA Cap, Translation Initiation Factor Eif4e 19 217 IPR023398 -
Eupl01g00647 224 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 28 213 IPR001040 GO:0003723|GO:0003743|GO:0006413
Eupl01g00647 224 SUPERFAMILY eIF4e-like 33 220 IPR023398 -
Eupl01g00647 224 ProSitePatterns Eukaryotic initiation factor 4E signature. 102 125 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00647 Eupl-Chr1 23482609 23491503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00647 5 224 Eukaryotic Initiation Factors Gene Family AT5G18110 75.909 1.09e-123 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00647 K03259 - vvi:100258939 406.757