Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00639 ATGGCGGTAGTCGTCGCTCAACCAGAAGTTAAGCTCTTCAACAGATGGTCCTTTGAAGACATCGAGGTTGGTGACATATCTTTGGCAGATTACATTGGTATTTCCACATCCAAGCATGCAACGTATGTCCCGCACACAGCTGGTAGGTACTCGGTGAAGAGGTTCAGGAAGGCCCAGTGCCCCATCGTGGAGAGGCTGACCAATTCCCTGATGATGCACGGTCGCAACAATGGGAAGAAGCTACTAGCTGTCCGCATCATCAAGCACGCCATGGAGATCATCCATCTCCTCACCGACCTCAACCCCATTCAAGTTATTGTAGATGCTGTGATCAACAGTGGACCAAGAGAAGATGCTACTCGAATTGGGTCAGCTGGTGTTGTGAGGCGTCAGGCTGTTGATATCTCTCCTCTGAGGCGTGTCAACCAGGCAATATATCTTCTTACAACAGGTGCTCGTGAGAGTGCTTTCAGGAATATCAAGACCGTAGCCGAATGCCTGGCAGATGAGCTCATAAATGCAGCCAAGGGGTCTTCCAACAGCTATGCCATTAAGAAGAAAGATGAGATTGAGCGAGTTGCCAAGGCCAATCGTTGA 597 0.4958 MAVVVAQPEVKLFNRWSFEDIEVGDISLADYIGISTSKHATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLLAVRIIKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTVAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00639 198 NCBIfam 30S ribosomal protein S7 9 198 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl01g00639 198 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 198 IPR000235 GO:0006412
Eupl01g00639 198 Pfam Ribosomal protein S7p/S5e 52 198 IPR023798 -
Eupl01g00639 198 CDD uS7_Eukaryote 11 198 IPR005716 GO:0003735|GO:0006412|GO:0015935
Eupl01g00639 198 ProSitePatterns Ribosomal protein S7 signature. 64 90 IPR020606 GO:0003723|GO:0003735|GO:0006412
Eupl01g00639 198 Gene3D Ribosomal protein S7 domain 1 198 IPR036823 -
Eupl01g00639 198 PANTHER RIBOSOMAL PROTEIN S7 7 198 IPR000235 GO:0006412
Eupl01g00639 198 SUPERFAMILY Ribosomal protein S7 11 198 IPR036823 -
Eupl01g00639 198 FunFam 40S ribosomal protein S5 1 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00639 Eupl-Chr1 23353868 23361626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00639 9 198 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 90.526 4.41e-133 370