Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00629 ATGGAATTATCAGCGGAAATGGCGTTTATGAAAAAGCATCTCATGAAAAGAAGAATGGAAGCCAAAGGAGGAGGAGAGGTGAGACGAGTGCATATCATATATTTCCTGAGTCGAATGGGTCGTATCGAGCATCCTCATCTCATCCGAGTCCATCATCTGAGTCGAAACGGCGTCCATTTACGAGATGTTAAGAGATGGCTATTGGAATTGCGAGGGAAAGATATGCCGGATTCATTTGCCTGGTCTTACAAGAGGAGATATAAGAACGGTTTTGTTTGGCAAGATTTGCTGGATGACGATCTCATCACTCCAATCTCAGACAATGAATACGTCCTTAAAGGCTCCGAAATCTCTGCAATTTCATTCGATCCTCGTGCATGCAGTGAAAAGACAGGTTCAACCCCAAAACCAGACCCACTCGAACCAAAGCCAGAAATCCCAGATACAAAGATTGATATCTCAACGAAAACACCCCAAATCGATGAAGATTCAGGACCGTTTGATTCAGAGGCATCAACGACAACCGATGAATCAAACAAAACTAGTGAGGTTTTCACGCCTGAAGTGAAGAAGCAGCCCTCGAACACCAGCATAACAGAAATAGAGGAACTGATCAGTGAGAATTCTTCTTCTTCTTGTTCTTCTCCTTCGTCGTCTCCTTCGTCGTCTCCTTCTTCTTCTGCTTCTCTTTTGAAGAAGAACAAGGAGAAGATCGTCGTAGAAAAGACAAAACCGGCTACGCCGTCGCGTCCTTCGTTCATTAAGAGCAAGAGCAAGGGCTACTCTTCTAATGTGTTTCGCAACCTACTCAATTGTCGTGTGGTCGACACGAACGATTCGGCGATGACGATGATCAAGAAGATGCCTACTAGTCCATCCAATAAAGCTGAGATTTGTAGAGTGGAGACTTTGGGTGGGTCCCAGAGGATCTTCGGTGGGCCTTGGAACAACCAACAACAACAGCAACAACAAAATACCAGGAGAAGTTATAGTGGAGTGAAGGATGCGAAGAAGTCAAGCGGGTTTGCGAACCAGAAAACAGTTTCTGCTGCTTTCAAGCCAGCAGCCGAGCCGAAATGCTCGCAATGCGGGAAGGCGTTCAAGCCGGAGAAACTGTACACACATATGAAGTCTTGTAGAGGTTTGAAAAGCTTAGGGAAGAGTCGTACTGCTGCTGATGGTGCCGCTGCTGAGAAGATGTCGCAGAGATCAGCGGATAGCTCCTCCAAGGGAGCAACCCCAAGCTATTACTTGACCCGCTAA 1263 0.4624 MELSAEMAFMKKHLMKRRMEAKGGGEVRRVHIIYFLSRMGRIEHPHLIRVHHLSRNGVHLRDVKRWLLELRGKDMPDSFAWSYKRRYKNGFVWQDLLDDDLITPISDNEYVLKGSEISAISFDPRACSEKTGSTPKPDPLEPKPEIPDTKIDISTKTPQIDEDSGPFDSEASTTTDESNKTSEVFTPEVKKQPSNTSITEIEELISENSSSSCSSPSSSPSSSPSSSASLLKKNKEKIVVEKTKPATPSRPSFIKSKSKGYSSNVFRNLLNCRVVDTNDSAMTMIKKMPTSPSNKAEICRVETLGGSQRIFGGPWNNQQQQQQQNTRRSYSGVKDAKKSSGFANQKTVSAAFKPAAEPKCSQCGKAFKPEKLYTHMKSCRGLKSLGKSRTAADGAAAEKMSQRSADSSSKGATPSYYLTR* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00629 420 MobiDBLite consensus disorder prediction 123 257 - -
Eupl01g00629 420 MobiDBLite consensus disorder prediction 310 338 - -
Eupl01g00629 420 MobiDBLite consensus disorder prediction 401 420 - -
Eupl01g00629 420 MobiDBLite consensus disorder prediction 383 420 - -
Eupl01g00629 420 MobiDBLite consensus disorder prediction 152 232 - -
Eupl01g00629 420 MobiDBLite consensus disorder prediction 310 330 - -
Eupl01g00629 420 PANTHER UPSTREAM OF FLC PROTEIN (DUF966) 18 396 IPR010369 -
Eupl01g00629 420 Pfam Protein SOSEKI, plant 30 130 IPR010369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00629 Eupl-Chr1 23248998 23256941 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl01g00629 DUF966 7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00629 - - ming:122061359 363.614