Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00614 ATGTCTCCCACTGTCGGTTTTGGCCGTTGGGCTTCTCCGTTAAAGAAACTGCAGCGCCACCACAAGCTTGTGCTAGCCTCGCCCTTTTCCAACACCGCCACCACAGAGAATAACAATGAGAAACCGAGTTCGCCTCCGCCTCCGCCGATCCAAGTTTCCTTCACCGAGTCAGCAGGCAGAGGTGTATTCGCGACTCGGAGAATCGGAGCGGGAGATCTCATCCACACTGCAAAACCCTTAGTCGCCCATCCTTCCCTCACCCTTCTCCCCAGCGTCTGCTACTTTTGCCTCAAAAAGTTAAATTTGGGAAGCAGAGTTCCTTCACCATCTCCAACTGTTCATTTCTGCAGCGACGAATGCGTAGAACAATCAAAGGTTTTTTACAAAGTTGAGAAGCAAGCAGATTGGTCAGCATATGATGACCACTGCAGACTGCGAGGTTTGAAATATCCACTTCTTGTAAAGCGGTTGGCTTGTATGGTTATATCAGGAGCAGCTTCTGCAGACATTCTTGACATACTTCAACCTGCCAGGCTATTCCCTGAGATGATTTTAGAGATGGAAGAGGAGTTTCACTTGCTGAAGAGCACTCTTATGAAAGGAAGAATCGAAGATGAACAGATGGCAGTCCTAACCAAGCAATGGTATACTGGCATTCTGGCACGGATCCGTATCAATGCATTTCGGGTTGAATTGGTTGGAGGATCATATGAGGATCTACTTTCATCAGCAGCAGCCTCTGTTGAGGCTGAAGCTGCTGTTGGCAATGCTATTTATATGCTTCCGTCCTTCTACAATCATGACTGTGATCCCAATGTTCACATTATATGGATAGAGAACGCAAATGCAAGATTGAAGGCCCTGCGTGACATTGAACCAGGGGAGGAGCTTCGTATTTGCTACATTGATGCAAGTATGGATCGTGGTGCTCGACAAACCCTCTTGTTTGAAGGGTTTGGTTTTCAGTGCAATTGTCCTCGGTGCATATCCGGTGATTAA 999 0.4735 MSPTVGFGRWASPLKKLQRHHKLVLASPFSNTATTENNNEKPSSPPPPPIQVSFTESAGRGVFATRRIGAGDLIHTAKPLVAHPSLTLLPSVCYFCLKKLNLGSRVPSPSPTVHFCSDECVEQSKVFYKVEKQADWSAYDDHCRLRGLKYPLLVKRLACMVISGAASADILDILQPARLFPEMILEMEEEFHLLKSTLMKGRIEDEQMAVLTKQWYTGILARIRINAFRVELVGGSYEDLLSSAAASVEAEAAVGNAIYMLPSFYNHDCDPNVHIIWIENANARLKALRDIEPGEELRICYIDASMDRGARQTLLFEGFGFQCNCPRCISGD* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00614 332 Pfam SET domain 59 301 IPR001214 GO:0005515
Eupl01g00614 332 CDD SET_SMYD 255 328 - -
Eupl01g00614 332 Gene3D - 145 227 - -
Eupl01g00614 332 MobiDBLite consensus disorder prediction 29 50 - -
Eupl01g00614 332 SMART set_7 48 308 IPR001214 GO:0005515
Eupl01g00614 332 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 330 - -
Eupl01g00614 332 Gene3D SET domain 61 328 IPR046341 -
Eupl01g00614 332 ProSiteProfiles SET domain profile. 48 302 IPR001214 GO:0005515
Eupl01g00614 332 Gene3D - 92 144 - -
Eupl01g00614 332 SUPERFAMILY SET domain 46 328 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00614 Eupl-Chr1 22883840 22889097 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl01g00614 SET 6.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00614 - - psom:113311104 457.988