Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00609 ATGAGTGTGGATCCGGTGCCTTCGAACTCTCATGGCCACATCGACGATCAGATTTCACAGCTTATGCAGTGCAAGCCCTTGTCCGAGCAAGAGGTCAGGGCATTATGTGAGAAGGCTAAGGAGATATTAATGGAAGAAAGCAATGTCCAGCCTGTGAAAAGTCCTGTGACGATCTGTGGTGATATTCATGGGCAGTTTCATGATCTCGCAGAACTTTTTCGAATTGGAGGAAAGTGTCCAGATACCAATTACTTGTTTATGGGAGATTATGTGGATCGTGGGTATTATTCGGTTGAAACTGTGACGCTTCTGGTGGCCCTGAAAGTGCGATACCCTCAACGAATTACAATTCTTAGAGGAAATCATGAAAGTCGTCAGATTACACAAGTTTATGGGTTTTATGATGAATGCCTACGAAAGTATGGCAATGCTAATGTATGGAAGATCTTCACAGACCTTTTTGATTATTTTCCTTTGACAGCTTTGGTTGAATCAGAAATATTTTGTCTGCATGGAGGATTGTCCCCGTCTATTGAGACCCTTGACAACATACGGAATTTTGACCGTGTTCAAGAAGTTCCTCATGAAGGGCCAATGTGCGATCTCCTATGGTCTGATCCAGATGACCGCTGTGGGTGGGGTATTTCTCCCCGTGGAGCCGGATATACTTTTGGCCAAGACATATCCGAGCAATTCAACCATACCAACAACTTAAAGCTGATTGCTAGAGCTCATCAACTTGTCATGGAGGGATTCAACTGGGGACATGAACAAAAGGTGGTGACCATATTTAGTGCACCTAATTATTGCTATCGTTGTGGAAACATGGCATCTATATTGGAAGTTGATGACTGCAGAGGACACACATTCATCCAGTTTGAGCCAGCTCCAAGGAGAGGAGAGCCAGATGTGACTCGCAGAACACCTGATTATTTCCTATGA 942 0.4406 MSVDPVPSNSHGHIDDQISQLMQCKPLSEQEVRALCEKAKEILMEESNVQPVKSPVTICGDIHGQFHDLAELFRIGGKCPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYPQRITILRGNHESRQITQVYGFYDECLRKYGNANVWKIFTDLFDYFPLTALVESEIFCLHGGLSPSIETLDNIRNFDRVQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGFNWGHEQKVVTIFSAPNYCYRCGNMASILEVDDCRGHTFIQFEPAPRRGEPDVTRRTPDYFL* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00609 313 CDD MPP_PP2A_PP4_PP6 14 297 - -
Eupl01g00609 313 SMART pp2a_7 27 297 IPR006186 GO:0016787
Eupl01g00609 313 Gene3D - 8 313 IPR029052 -
Eupl01g00609 313 FunFam Serine/threonine-protein phosphatase 7 313 - -
Eupl01g00609 313 Pfam Calcineurin-like phosphoesterase 55 246 IPR004843 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 237 257 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 117 141 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 55 82 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 181 208 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 84 111 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 152 178 IPR006186 GO:0016787
Eupl01g00609 313 PRINTS Serine/threonine phosphatase family signature 259 275 IPR006186 GO:0016787
Eupl01g00609 313 SUPERFAMILY Metallo-dependent phosphatases 13 298 IPR029052 -
Eupl01g00609 313 ProSitePatterns Serine/threonine specific protein phosphatases signature. 118 123 IPR006186 GO:0016787
Eupl01g00609 313 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 13 313 IPR047129 GO:0004722
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00609 Eupl-Chr1 22833832 22845302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00609 34 243 Calmodulin-binding Proteins AT5G63870 34.524 5.60e-33 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00609 K04382 - ming:122089244 656.366