Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00604 ATGGCTTCAAGACCTATTGTTCAACACAGACCTACAGGTGGGGCAGTTGCCGGGGGAGCCAAGCAGAAGGCCAGTGAAGCCGAAGGAAATAACCGGCGTGCGCTTGGAGATATTGGGAATCTAGTTCCTGTTCGAGTTGCAGAAGGGAAAGCGCAGCCCCAGTTCAATCGCCCTGTAACAAGGAGCTTTTGTGCGCAAATACATGCTAACACACAAGGGGTAGGAGGGGAAAATAATAAGAAACAAGTTGCAGTAGTTGTCAATGGAGCCGCGGTGGGAAAAGGAGGTGTGGCAGGAAAGGCAGCTCAAAAGAAGGTTACGGTTAAGCCAAAACCCAAGACCAAAATCGAGATAAGCTCAGACAGAAAAGAAGGGACTGGAAAGGAAAAATGTAAAAGCCAGAGAGCATCAAGGAAGAAAGTTCAGACACTCACTTCAATCCTAACTGCTCGAAGCAAGGCTGCTTGTGGTATAACGAATAAACCGAAGGACCCCATTGTCGACATCGATGCAGCAGATGTTGCTGATGAGTTGGCAGCAGTGGAATATGTCGAAGATATATACAAATTTTACAAGCTCACAGAGAATTCGAGTCGAGTTCATGACTACATGGACTCACAGACCGAGATTAATGAAAGGATGAGGGCAATTCTAGTGGACTGGCTGGTAGAAGTTCATAAGAAGTTTGAACTCATGCCTGAAACCCTTTATCTTACCATCCATATAGTTGATCGATTCCTTTCGATGGAAACAGTCCCGAGGAGGGAGTTGCAGCTAGTAGGCGTAAGCGCCATGCTCATAGCTAGTAAATATGAGGAAATTTGGGCACCAGAGGTATTTATAATGTTAAAATGTTTGATAATTGTTTTTGTGGATGGTCAAGGGACTAATTACAAAACTGGGTGGTTGCAGGTCAATGACTATGTTTGCATCTCAGACAAGGCCTACAACCGAGAACAGATATTGGTCATGGAGAAAGCAATCTTGGGTATGCTCGAATGGACCTTAACCGTCCCTACGCACTACGTCTTCCTTGTGCGCTTTATCAAGGCTGCTGTGTCTGATCAGGAGATGGAGAACATGGTATTCTTTCTGGCGGAGCTGGGTCTGATGAACTATGCAATGATAATGTACTGTCCCTCTATGGTGGCCGCTTCTGCAGTCTACGCAGCACGATGCACCCTGAACAAGAGCCCTCTTTGGAGCGAAACTCTTAAGCTCCACACGGGTTTCTCTGAACCACAGCTTATGGATTGTGCCAAGCTATTGGTGAACTTCCACTCAGCATCTGAGGAAAATAAGCTGAAGGTGGTTTACAGGAAGTATTCGGATCCTCAGCGTGGCGCTGTTGCTCTACACCCACCAGCCAAAAACCTCTTGGCTTGA 1386 0.4654 MASRPIVQHRPTGGAVAGGAKQKASEAEGNNRRALGDIGNLVPVRVAEGKAQPQFNRPVTRSFCAQIHANTQGVGGENNKKQVAVVVNGAAVGKGGVAGKAAQKKVTVKPKPKTKIEISSDRKEGTGKEKCKSQRASRKKVQTLTSILTARSKAACGITNKPKDPIVDIDAADVADELAAVEYVEDIYKFYKLTENSSRVHDYMDSQTEINERMRAILVDWLVEVHKKFELMPETLYLTIHIVDRFLSMETVPRRELQLVGVSAMLIASKYEEIWAPEVFIMLKCLIIVFVDGQGTNYKTGWLQVNDYVCISDKAYNREQILVMEKAILGMLEWTLTVPTHYVFLVRFIKAAVSDQEMENMVFFLAELGLMNYAMIMYCPSMVAASAVYAARCTLNKSPLWSETLKLHTGFSEPQLMDCAKLLVNFHSASEENKLKVVYRKYSDPQRGAVALHPPAKNLLA* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00604 461 SUPERFAMILY Cyclin-like 338 457 IPR036915 -
Eupl01g00604 461 MobiDBLite consensus disorder prediction 111 136 - -
Eupl01g00604 461 FunFam G2/mitotic-specific cyclin-1 334 451 - -
Eupl01g00604 461 ProSitePatterns Cyclins signature. 215 246 IPR006671 -
Eupl01g00604 461 MobiDBLite consensus disorder prediction 1 32 - -
Eupl01g00604 461 Pfam Cyclin, C-terminal domain 339 455 IPR004367 -
Eupl01g00604 461 Pfam Cyclin, N-terminal domain 186 336 IPR006671 -
Eupl01g00604 461 CDD CYCLIN_AtCycB-like_rpt2 339 455 - -
Eupl01g00604 461 FunFam Cyclin-B1-4 199 333 - -
Eupl01g00604 461 MobiDBLite consensus disorder prediction 111 132 - -
Eupl01g00604 461 SUPERFAMILY Cyclin-like 176 336 IPR036915 -
Eupl01g00604 461 CDD CYCLIN_AtCycB-like_rpt1 163 334 - -
Eupl01g00604 461 PIRSF Cyclin_A_B_D_E 304 461 IPR046965 GO:0016538|GO:0044772
Eupl01g00604 461 PIRSF Cyclin_A_B_D_E 2 283 IPR046965 GO:0016538|GO:0044772
Eupl01g00604 461 Gene3D - 331 461 - -
Eupl01g00604 461 SMART Cyclin_C_2 339 456 IPR004367 -
Eupl01g00604 461 SMART cyclin_7 220 330 IPR013763 -
Eupl01g00604 461 SMART cyclin_7 343 425 IPR013763 -
Eupl01g00604 461 PANTHER CYCLINS 135 444 IPR039361 -
Eupl01g00604 461 Gene3D - 200 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00604 Eupl-Chr1 22758511 22761623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00604 1 460 Core Cell Cycle Gene Families AT4G37490 51.392 2.81e-139 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00604 K21777 - nnu:104593604 554.673