Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00581 ATGCAGTCGGAAAACTTGCTGGGATGTTCAGAACTGTACCGGTTTTTGGCCGGGAGCAGTGGGATGGACGTCGGATCATACGGAATTCCTGCGAATTATGATTTTGCGGGAGTCCCCAGCTTTTCTGATTCCTCGTTTTACCCCTTCGAGATGTCCGGAATTACGGAGATGCCACAAGCTCGAGCTCTATCTGCTTCCAGGAATCACAGAGAAGCAGAGAAACGGCGAAGAGAGAGGATCAATTCGCATCTCGATAGGCTTCGAAGCCTTCTTCCCTGCAATTCCAAAACAGACAAGGCTTCACTATTAGCGAAGGTGATCCAACACGTCAAAGAGTTAAAGCAACGGACCATGGAGATCACCGAGCTCGACCTTTTCCCGTCCGAAACCGACGAGATTAGTGTATTTTCAGGAGATTTTTCTGGAGATGGGAGATCGGTTTTGAAGGCGTCTTTATGCTGTGAAGATCGATCCGATCTGTTACCTGATCTGATCGAAACACTGAAATCGCTCCGTTTGAAGACTCTTAGAGCGGAGATGGCGACGTTAGGAGGAAGAGTCCGAAACGTTCTTCTCATCACTGGAGAAGAAGAAGAAGATCACGTCGACGAATCGATCGGTTTCTTACGCGAAGCCTTGAAAACTCTAATCGAACGCTCAAGTTCCGGCGATCGTTCTAAAAGACGACGGATCTTAGATCGTAGAACAACAACAACAATTTGA 723 0.4758 MQSENLLGCSELYRFLAGSSGMDVGSYGIPANYDFAGVPSFSDSSFYPFEMSGITEMPQARALSASRNHREAEKRRRERINSHLDRLRSLLPCNSKTDKASLLAKVIQHVKELKQRTMEITELDLFPSETDEISVFSGDFSGDGRSVLKASLCCEDRSDLLPDLIETLKSLRLKTLRAEMATLGGRVRNVLLITGEEEEDHVDESIGFLREALKTLIERSSSGDRSKRRRILDRRTTTTI* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00581 240 Gene3D - 60 123 IPR036638 GO:0046983
Eupl01g00581 240 PANTHER TRANSCRIPTION FACTOR BHLH30 54 234 IPR045847 GO:0003700|GO:0006355
Eupl01g00581 240 CDD ACT_UUR-ACR-like 151 217 - -
Eupl01g00581 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 64 113 IPR011598 GO:0046983
Eupl01g00581 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 117 IPR036638 GO:0046983
Eupl01g00581 240 SMART finulus 70 119 IPR011598 GO:0046983
Eupl01g00581 240 FunFam transcription factor bHLH30 59 122 - -
Eupl01g00581 240 Pfam Helix-loop-helix DNA-binding domain 67 113 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00581 Eupl-Chr1 22276690 22278334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00581 12 221 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G41130 59.361 4.42e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl01g00581 HLH 1.3e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00581 - - nnu:104607812 350.132