Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00567 ATGGCTTTCATGGTGGAGAGGTGTGAAGAGATGGTGTTTTCTGTGGATCCTCATAAGGCAGTTCCTGCACCATTCTTGACTAAGACCTACCAGCTAGTAGATGACCCACGCACAGACCATGTTGTGTCTTGGGGTGAAGATGAGACAACCTTTGTGGTGTGGAGACCTCCGGAGTTTGCAAGGGATCTCCTTCCCAACTACTTCAAACACAACAACTTCTCAAGCTTTGTTAGGCAGCTCAACACCTATGGATTTAAGAAGATTGTTGCAGATAGATGGGAGTTTGCAAATGAGTTCTTTAGAAAAGGAGAGAAACATTTATTGTGTGATATTCACAGAAGGAAGACATCTCAAAACTCTCAACAACATCACCAACACTGCCATGATTTACCACCTCAATTTCTAAGTCCAGATGAAAACAGTGGTTGGATTGAGTCTCCATTACCATCACCCACCGGAGAATCCGATTTTCTATCGGCGCTTGCAGAGGATAATCGGAGACTAAGGAGAAGGAACTTCATGCTCTTATCAGAACTTGCTCACATGAAGAAGCTTTACAATGACATTATCTATTTCCTCCAGAACCATGTAAAACCAGTACCTATAGACCAAAGGACTATAAATCCAGGGCCTAAGATCATAGAAATGGGTCCTCCTCTTCAGTCTCATCAATCACTTTTCGATCTCCAAAACTTAAAAACTCGCAGTTCGAGTAGCTGTTCTATGACATTAGCGGAGGAATCGAATAGCACTGTCAAGCTCTTTGGGGTTCCTCTTAGCGGCAAGAAGAGATTGCACCCGGAAAAGATCGATCGCGAAGAATTGGAACGTGGGATTTTTCTTGGTTAG 849 0.4335 MAFMVERCEEMVFSVDPHKAVPAPFLTKTYQLVDDPRTDHVVSWGEDETTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFKKIVADRWEFANEFFRKGEKHLLCDIHRRKTSQNSQQHHQHCHDLPPQFLSPDENSGWIESPLPSPTGESDFLSALAEDNRRLRRRNFMLLSELAHMKKLYNDIIYFLQNHVKPVPIDQRTINPGPKIIEMGPPLQSHQSLFDLQNLKTRSSSSCSMTLAEESNSTVKLFGVPLSGKKRLHPEKIDREELERGIFLG* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00567 282 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl01g00567 282 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Eupl01g00567 282 FunFam Heat stress transcription factor B-4 17 115 - -
Eupl01g00567 282 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl01g00567 282 Gene3D - 17 116 IPR036388 -
Eupl01g00567 282 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl01g00567 282 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl01g00567 282 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl01g00567 282 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 227 IPR027725 -
Eupl01g00567 282 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00567 Eupl-Chr1 21928909 21930834 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00567 19 266 HSF AT1G46264 54.795 5.91e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl01g00567 HSF_DNA-bind 4.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00567 K09419 - nnu:104589529 431.024