Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Eupl01g00555 | ATGGCGACGATCAGCCTGCGAAAGGGAAACACGCGTCTCCCGCCCGAAGTGAACAGAGTTCTGTACGTTCGAAATCTCCCCTTCAACATTTCGAGCGAGGAGATGTACGATATCTTTGGCAAATACGGTGCCATCCGGCAGATACGTATAGGTACGAACAAGGATACGAGGGGTACGGCCTTCGTCGTCTACGAAGACATCTACGATGCCAAGACGGCCGTTGATCACCTGTCAGGGTTCAACGTCGCAAATCGCTATCTGATCGTGTTGTACTATCAGCAGGCGAAGATGAGCAAGAAGGTCGATCAGAAGAAGAAGGAGGACGAGATCGCAAGGATGCAGGAGAAGTATGGAGTGTCCACCAAAGACAAGTGA | 375 | 0.512 | MATISLRKGNTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRIGTNKDTRGTAFVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKVDQKKKEDEIARMQEKYGVSTKDK* | 125 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Eupl01g00555 | 124 | PANTHER | RNA-BINDING MOTIF PROTEIN, X-LINKED 2 | 21 | 109 | - | - | |
Eupl01g00555 | 124 | CDD | RRM_SF3B14 | 17 | 93 | IPR034150 | - | |
Eupl01g00555 | 124 | SUPERFAMILY | RNA-binding domain, RBD | 7 | 101 | IPR035979 | GO:0003676 | |
Eupl01g00555 | 124 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 21 | 87 | IPR000504 | GO:0003723 | |
Eupl01g00555 | 124 | FunFam | splicing factor 3B subunit 6-like protein | 15 | 118 | - | - | |
Eupl01g00555 | 124 | SMART | rrm1_1 | 20 | 90 | IPR000504 | GO:0003723 | |
Eupl01g00555 | 124 | Gene3D | - | 15 | 119 | IPR012677 | - | |
Eupl01g00555 | 124 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 19 | 94 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Eupl01g00555 | Eupl-Chr1 | 21436526 | 21437443 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Eupl01g00555 | 18 | 91 | Eukaryotic Initiation Factors Gene Family | AT4G34110 | 28.571 | 8.70e-06 | 41.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Eupl01g00555 | K12833 | - | nnu:104590492 | 247.284 |