Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00554 ATGGGGAGTAGAACAGTGAGGAGGGTTGGTGCAGAAGATGATAAAGAAGCAGCAGGCGGGATGCCGAGCTTTGTGCCTCCATTGGCCGTCTCTCATACACTTGGCACAGAGGGAAACCGCATCCATTCTTCTCGAGTTTCTGACTTTGGGGCGCTTGAGCAATCCATTGGATTTCGCGTAGAGGATGCTGTTGATCTTAGTGGAAACCTGGTGTTTAATCGAACAAAGTTAAGTGACCAGGCTATTGCTTCTGCTCCACTCCAATTTGGCAATTTTAACAAGTTACTTGTTTCCTCGGATATAACTTCATCTGCTGCTAGAGTTGGGTCTCAGAGGTTACCATCACAAAAGGGACAACAACAAAATCTGGTTTCTATATCTACTGGGCATTTTGAGAACTGGGGAGAGTCCAAAATGGCAGATGCCAGTCCTAGGACCGATACTTCAACAGATGTGGATACAGACGATAAGAATCAAAGGTTTGAAACGGGCCCATCTACTGGTGTAGTGGCTTCTGATTCCAGTGACAGATCAAAGGAAAAAACAGGGGATCAGAAGACACTTCGTAGACTTGCTCAAAATCGTGAAGCTGCAAGAAAAAGCCGATTGAGGAAGAAAGCATATGTCCAACAGCTAGAGACTAGTCGACTGAAGCTGACCCAACTTGAGCAGGAGCTCCAGCGAGCTCGCCAGCAGGGCATCTTCATTTCAAGCTCAGGAGACCAACCTCATTCCATGAGTGGAAATGGAGCCTTGGCATTCGATATAGAATATGCACGGTGGCTGGAAGAGCACAACCGGCAGGTCAATGAGCTGAGGGCGGCGGTGAACTCCCATGCAAGCGACAACGAACTTCGTGGTATTGTGGATGGAATCATGGCGCACTATGATGATATTTTCAGACTGAAGGGCATTGCAGCCAAGGCTGACGTCTTCCACATGCTATCAGGCATGTGGAAGACACCAGCAGAGAGGTGTTTTCTGTGGCTTGGGGGCTTTCGATCATCAGAACTTCTCAAGCTTCTTGTGAATCAATTGGAGCCTCTTACCGAGCAGCAGTTGATGGGCATCTGCAATTTGCAGCAGTCATCTCAACAGGCAGAGGATGCCTTGTCGCAAGGGATGGAGGCGCTCCAGCAGTCCTTGGCTGAGACATTGGCTAATGGGTCTCTTGGCCCCTCGGGATCATCTGGTAACGTGGCAAACTATATGGGTCAGATGGCGATGGCCATGGGAAAGCTTGGAACTCTTGAAGGTTTCCTTCGCCAGGCTGACAATCTGCGGCAGCAAACACTGCAACAAATGCACAGAATATTGACAACCCGCCAATCAGCACGTGCTCTCCTTGCAATAAACGACTATTTCTCCCGGCTCCGTGCTCTTAGTTCCCTCTGGCTGGCCCGCCCACGGGAGTGA 1416 0.4958 MGSRTVRRVGAEDDKEAAGGMPSFVPPLAVSHTLGTEGNRIHSSRVSDFGALEQSIGFRVEDAVDLSGNLVFNRTKLSDQAIASAPLQFGNFNKLLVSSDITSSAARVGSQRLPSQKGQQQNLVSISTGHFENWGESKMADASPRTDTSTDVDTDDKNQRFETGPSTGVVASDSSDRSKEKTGDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLTQLEQELQRARQQGIFISSSGDQPHSMSGNGALAFDIEYARWLEEHNRQVNELRAAVNSHASDNELRGIVDGIMAHYDDIFRLKGIAAKADVFHMLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLMGICNLQQSSQQAEDALSQGMEALQQSLAETLANGSLGPSGSSGNVANYMGQMAMAMGKLGTLEGFLRQADNLRQQTLQQMHRILTTRQSARALLAINDYFSRLRALSSLWLARPRE* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00554 471 Coils Coil 262 282 - -
Eupl01g00554 471 Coils Coil 205 232 - -
Eupl01g00554 471 FunFam BZIP family transcription factor 185 234 - -
Eupl01g00554 471 PANTHER TRANSCRIPTION FACTOR TGA9 121 471 - -
Eupl01g00554 471 ProSiteProfiles DOG1 domain profile. 251 468 IPR025422 GO:0006351|GO:0043565
Eupl01g00554 471 SUPERFAMILY Leucine zipper domain 186 229 IPR046347 GO:0003700|GO:0006355
Eupl01g00554 471 MobiDBLite consensus disorder prediction 1 24 - -
Eupl01g00554 471 Pfam Seed dormancy control 268 343 IPR025422 GO:0006351|GO:0043565
Eupl01g00554 471 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 189 204 IPR004827 GO:0003700|GO:0006355
Eupl01g00554 471 SMART brlzneu 182 245 IPR004827 GO:0003700|GO:0006355
Eupl01g00554 471 CDD bZIP_HBP1b-like 186 238 - -
Eupl01g00554 471 Gene3D - 185 236 - -
Eupl01g00554 471 MobiDBLite consensus disorder prediction 174 189 - -
Eupl01g00554 471 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 184 228 IPR004827 GO:0003700|GO:0006355
Eupl01g00554 471 Pfam bZIP transcription factor 186 226 IPR004827 GO:0003700|GO:0006355
Eupl01g00554 471 MobiDBLite consensus disorder prediction 134 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00554 Eupl-Chr1 21413843 21427210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00554 139 471 bZIP Transcription Factor Family AT3G12250 78.078 8.82e-180 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Eupl01g00554 DOG1 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00554 K14431 - nnu:104589024 760.755