Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00551 ATGTTTATACACTTGGTCCTCGTTTATCCTACATTTTTGTATTTCATATTTGTGACAGTAAGCAAAATGGATTTCGTTGGGCCAGTGTGCGAATTCGTGAAATGTCTATGGGATCCTCTCGTTCGACAAATCCACTATGTCAAAAACCTTAAAGAAAATTTCAAGAAGCTCAACAAGAAAGCAACATATCTTTATGCAAAGAGGGAGGATGTCAACATTGCGCTAAATAGAGGTACGGTGTTAAAAATGCCAACGAACGAATGTAAAGCTTGGCTTGACGAGGTGGACAAGATTGAAAAACAAGTGAAGGAGATAGAAGAAGAATTTCAAACAAACAAGAGATGCCTAAGCGGATGGTGCCCTGACATATGGTGGCGCAAGAAGCTAGGCAAATGTTTAGTGAGTATGATAGATGATGTCACTGAGCTTATCAATGAATCTGATTTCAAGGGTGGAGTGGTGGTTGATGCACCAATGGTTGATGCTGCAATGCTTGAGGCACCACTAGAGATAGTTGAGAGAACAGCTACGCCAACTATAAAGGGCGAAACATCAACTGATCGCACTGTACAGAAGATATTGAGATGCATAAAAAATGAAGAAATTCAAAAGATTGGTGTGTGGGGAATGGGTGGGGTTGGTAAGACAACAGTAATGAAAATTTTGAACAACCTACCTGAATTAACCCAGATGTTTCAAATTATCATTTGGGTAACTGTTTCAAAAGATTGGAGTGTGAGGAACATTCAGAAAGAAATTGCACGACGATTACAGCTAGAGTTGAAGTTGGATGACTCCAATGATAGTGTAGCAAACAAATTATTTCAAAAGTTGGAGTCCATTAAATACTTGCTTCTTTTGGATGATGTGTGGAGCATGGTAAATTTGGAAGAGGTAGGAGTCCCTTGCCCAAGCAAAAGTAGTGGTTGCAAGATGGTATTGACAAGTCGATTTCGTGATGTTTGTAACAAAATGGGAACTGATGAAAACATCAAAGTGGAGGTTTTGTTTCAAGAAGAGGCATGGGATTTGTTTCATGCAAAAGTTGGTGATGTTGTGGATTCTGCAGATATAAAAACCTTAGCTAGAGCTGTTGTTAAGGAGTGCGAGGGTCTACCTCTTGCTATTCTTGTCGTAGGAGGATCTTTGAGAAAGGTGAATGATGTTCACGTGTGGAAGAATGCAGTAAAGGAGTTGAAATCGGCTACATTTGAGATTGGTGATATGGAAGAGTTAGTGTTTAATCGGTTGAAGTTTAGTTACGAGCGATTAAAGAATGACAATGTGAAGAATTGTTTTTTGTATTGTGCATTGTTTCCTGAAGATTATGAGATCTCGGCACTTGAATTAATTGAATATTGGAGAATGGAGGGACTCATTGATGGCACGCTAAATTTGGAAGAGGCATATGATAAAGGGCATACTATATTGAATGTTCTTACAGATGCCTCTTTGTTGGAGAAAGGTTTTACCGATGAATTACATGTGAGGATGCATGATGTGATCAGAGACCTAGCATTGAGAGTCACATCTCCAAAGGAAGAAGAAGGTTATAGATTTTTAGTAAGAGCTGGTGTAGGGATAGAGGAGTGTTTAAACGTGGAGGAATGGGAACATAGCATGAGGATTTCATTGATGAATAATAAACTATGCAGATTGCCAGACAGACCTACATGCAACTTGCTCACCACTTTATTACTGCAGAACAATTTAGAGTTGAATACAATCCCTGAATCATTCTTTGAACATATGCACAACCTTAAAGTTCTAAATCTATCAAACACTGGTATAGAGATGCTACCATCGTCACTTTCCAACCTAGTAAGTCTTCGAGGCTTTTTTCTAAGAGATTGTGACAATTTAGAGTCTTTACCATCTAAAGTTGGAGATCTCAAGAGCCTTGAAGTGCTTCATCTTGGAAACAATGTTGAATACTTGCCTATTGAGGTTAAGCAACTGACTCGTCTAAGGAGTTTACAAGTGACATTCACAATCGAAAATGAAGAAGATGTAGGGAGGAGAAGGATGCTTTCCCGTGGGGTGATACCAAGTCTTGATTTATGGAAAGATCAACAATACACATCATTCCACCTTTCTGTCAGATCAAAAATTTATAAGTCTCCCTCCGGTTATTCGTTAACCAAGGTGAAAGTTGGACACAAACATGAACGCGTGCGACACTTGAAATGGTGTGGGGGTGGGGGCGATAACATCCCTAGTGCGATCATGGAGGCACTCAATCAAGCTTGTTGTTTCACTTTGGAGAATCATCAGACTGTTAAGAAGTTGTCGGATCTCGGCATGGAAAACATGAATGGGCTCCATTTCTGTTACATTAGCAAGTGCAATGCAATTGAAACCATTGCAGACGATGGAAATGCTGCTTTACAAAACATACAAATCTTGATTCTGCAAAATTTGCCCAAGTTGAGGAGCATTTGGGAGGGGCCGGCGATGCCACTTCAAAGCTTCTCTACCTTAACACATTTGCACGTGGAAGGGTGTAGAAAGCTGAGAAATGTGTTCTCGCGGAGCATGTTTCAACATATGTCAAACCTAGAAGTGCTTTGTGTCACCTGGTGTAAGGGAATTGAAGAGATAGTGAATGAAGACGACCAGACAATTGTCGATTACAACAAAGATGTCGTGATCCTCCCAAAATTGAAGAATTTGAAACTTTGCTACCTGGGTAATCTAGTTAGAGTTTGCAAAACAGTCTCGATGCCTTGGCCATCGCTAAATACAATTGCGGTTGAAGGATGTGGAAATCTGAAGAATCTCCCTTTGAGCGCCGTCCACAATGCACCTGCTCTAAGTGAGATTAGAGGGGAAAGAGAATGGTGGGAAGAATTGGAATGGGTAGATGATGACATTAAACAACAACTCCAACCACTCTTCACCCCGTTTCCTGGTTACACCTACTCGGCATTTTACCAAGTTCAATAG 2946 0.4026 MFIHLVLVYPTFLYFIFVTVSKMDFVGPVCEFVKCLWDPLVRQIHYVKNLKENFKKLNKKATYLYAKREDVNIALNRGTVLKMPTNECKAWLDEVDKIEKQVKEIEEEFQTNKRCLSGWCPDIWWRKKLGKCLVSMIDDVTELINESDFKGGVVVDAPMVDAAMLEAPLEIVERTATPTIKGETSTDRTVQKILRCIKNEEIQKIGVWGMGGVGKTTVMKILNNLPELTQMFQIIIWVTVSKDWSVRNIQKEIARRLQLELKLDDSNDSVANKLFQKLESIKYLLLLDDVWSMVNLEEVGVPCPSKSSGCKMVLTSRFRDVCNKMGTDENIKVEVLFQEEAWDLFHAKVGDVVDSADIKTLARAVVKECEGLPLAILVVGGSLRKVNDVHVWKNAVKELKSATFEIGDMEELVFNRLKFSYERLKNDNVKNCFLYCALFPEDYEISALELIEYWRMEGLIDGTLNLEEAYDKGHTILNVLTDASLLEKGFTDELHVRMHDVIRDLALRVTSPKEEEGYRFLVRAGVGIEECLNVEEWEHSMRISLMNNKLCRLPDRPTCNLLTTLLLQNNLELNTIPESFFEHMHNLKVLNLSNTGIEMLPSSLSNLVSLRGFFLRDCDNLESLPSKVGDLKSLEVLHLGNNVEYLPIEVKQLTRLRSLQVTFTIENEEDVGRRRMLSRGVIPSLDLWKDQQYTSFHLSVRSKIYKSPSGYSLTKVKVGHKHERVRHLKWCGGGGDNIPSAIMEALNQACCFTLENHQTVKKLSDLGMENMNGLHFCYISKCNAIETIADDGNAALQNIQILILQNLPKLRSIWEGPAMPLQSFSTLTHLHVEGCRKLRNVFSRSMFQHMSNLEVLCVTWCKGIEEIVNEDDQTIVDYNKDVVILPKLKNLKLCYLGNLVRVCKTVSMPWPSLNTIAVEGCGNLKNLPLSAVHNAPALSEIRGEREWWEELEWVDDDIKQQLQPLFTPFPGYTYSAFYQVQ* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00551 981 SUPERFAMILY L domain-like 488 941 - -
Eupl01g00551 981 Gene3D - 336 420 IPR042197 -
Eupl01g00551 981 PRINTS Disease resistance protein signature 369 383 - -
Eupl01g00551 981 PRINTS Disease resistance protein signature 582 598 - -
Eupl01g00551 981 PRINTS Disease resistance protein signature 204 219 - -
Eupl01g00551 981 PRINTS Disease resistance protein signature 277 291 - -
Eupl01g00551 981 Pfam Leucine rich repeat 562 618 IPR001611 GO:0005515
Eupl01g00551 981 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 42 928 - -
Eupl01g00551 981 FunFam Probable disease resistance protein At1g61300 167 330 - -
Eupl01g00551 981 FunFam Probable disease resistance protein At5g66910 335 420 - -
Eupl01g00551 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 436 IPR027417 -
Eupl01g00551 981 Coils Coil 88 108 - -
Eupl01g00551 981 Gene3D - 421 508 IPR036388 -
Eupl01g00551 981 Gene3D Ribonuclease Inhibitor 696 953 IPR032675 -
Eupl01g00551 981 Gene3D - 169 333 IPR027417 -
Eupl01g00551 981 Pfam NB-ARC domain 189 422 IPR002182 GO:0043531
Eupl01g00551 981 Gene3D Ribonuclease Inhibitor 509 670 IPR032675 -
Eupl01g00551 981 FunFam Probable disease resistance protein At1g63360 421 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00551 Eupl-Chr1 21343136 21369903 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00551 201 519 WRKY Transcription Factor Family AT5G45050 23.939 9.74e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00551 K13459 - msin:131240009 773.852