Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00534 ATGGCGGAATACGGGGGAGCGATCTCGCACTCGGAAACGCGAGAGTGCAACAGCTCCGAAGACGAAGAAGACGAGCATAGCCCAAGGAACGGGGTTGATCCAGTCATGGCTGACACTAGCGGTGGTGGTGCATCGAAGACAAAGATCAACAACAACAATGCTGATGGAGACGTTGGATCAACGTTGGAGGTTGCTAGGAAGCCGAGGGGCCGACCTCCAGGGTCTAAGAACAAACCGAAGCCACCCATCGTGATTACCAAAGACAGCGAGTCAGCCATGCGACCAGTCGTCCTCGAGGTATCCGCCGGATCCGACGTCGTCCAAATGGTCACAAACTTCGCTCGTCGACGCCACGTAGGTCTCTGCGTACTCACCGGCTCCGGCACTGTAGCAAACGTAACCCTCCGCCACCCCACTTCCCATAACGCTACACTTACTATCCCCGGCCGCTTCGAGATTCTTTCCCTCTCAGGCTCATTTCTTCCTTCTTCATCTTCTCACACAAAATCTCCTCCTCCTACTCATTTTACTATCTCTCTTGCAGGAGGTCAAGGTCAGGTGATTGGGGGGACTGTTGCAGGAACACTTATAGCTGCAAGTCCTGTAGTTTTAGTAGCAACTTCGTTTGTTAACCCTTCATTCCACCGACTTCCAAGTGAAGATGAAGAAGCTGATATTAAACCAAGTGTTGTAGGGAGCGACTCTTGCACTACTAGTATGTCCATGTCTGTGTATAGTGTTGCTGCTCCAAGCCCTTTAAATTGCCAGATTCCTCCTGATATCTTACCTTGGGCTCCCACCTCTCGTCCTCCTTACTGA 819 0.5165 MAEYGGAISHSETRECNSSEDEEDEHSPRNGVDPVMADTSGGGASKTKINNNNADGDVGSTLEVARKPRGRPPGSKNKPKPPIVITKDSESAMRPVVLEVSAGSDVVQMVTNFARRRHVGLCVLTGSGTVANVTLRHPTSHNATLTIPGRFEILSLSGSFLPSSSSHTKSPPPTHFTISLAGGQGQVIGGTVAGTLIAASPVVLVATSFVNPSFHRLPSEDEEADIKPSVVGSDSCTTSMSMSVYSVAAPSPLNCQIPPDILPWAPTSRPPY* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00534 272 MobiDBLite consensus disorder prediction 43 58 - -
Eupl01g00534 272 SUPERFAMILY AF0104/ALDC/Ptd012-like 91 224 - -
Eupl01g00534 272 ProSiteProfiles PPC domain profile profile. 90 232 IPR005175 -
Eupl01g00534 272 MobiDBLite consensus disorder prediction 14 31 - -
Eupl01g00534 272 Gene3D - 93 231 - -
Eupl01g00534 272 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 235 IPR014476 GO:0003680
Eupl01g00534 272 Pfam Plants and Prokaryotes Conserved (PCC) domain 94 211 IPR005175 -
Eupl01g00534 272 MobiDBLite consensus disorder prediction 1 87 - -
Eupl01g00534 272 CDD DUF296 94 209 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00534 Eupl-Chr1 20812387 20813757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00534 60 272 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 47.137 6.07e-63 197