Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00528 ATGTTAGCACTATCCCCTCCTTTGTTTTCAACCTCTGGGTGGCCATTAGAAGATCAAATGAGCCATGAGAACTGGACAGTTAATGACCCTTTTATGGACTCCAACTATAGACAACCAGAAACTTTGGAATCATCATATGGTTTTCCTTCCTATCATCAACCAGTCATTCATGAGCTCAATGAACCCAGGCCTTCTGGTTCGATTATTGGCGACCCATCAACCGATAAGAAATTCAACCATAATGCTAGTGAGAGAGATCGTCGGAAAAAGTTGAACGGTTTATACTCCACTCTCCGATCGCTACTTCCTCGGACAGATCAAATGAAGAAATTAAGCATTCCAGCTACTGTTTCTCATGTACTAAAATACATACCAGAGCTGCAAAAGCAAGTTAGGAGACTAATACAAAGAAAGGAAGAGATCTTATCAAGTTTTTCAAGGCAAGGAGAACTCACTTCTCTTCCCAAGCAAAGGAAAGGTGACATTGGACAGTCTTTGCCTACTGTTTCGGCGAGTCGAGTGGACGATAGAGAAGTTGTGATTCAGATATCTACATTTAAGTTCAAGAGGAGTCGACTCTCTCAGGTTTTACTAAATTTGGAGGGGGAGGACCTTCAAATCCTTAATGCTTCAGTTTTTGCCTCTTTTGGAGATAGGGTCTTCTACAATCTCCATCTTCAGGTGAATGGAACACAGAAGATGGAGTGTGAGGTTTTGAGTGAAAAGCTTCTCTCTTTGTGTGAAGGGGAAGAGTTGTTCCCATAA 765 0.417 MLALSPPLFSTSGWPLEDQMSHENWTVNDPFMDSNYRQPETLESSYGFPSYHQPVIHELNEPRPSGSIIGDPSTDKKFNHNASERDRRKKLNGLYSTLRSLLPRTDQMKKLSIPATVSHVLKYIPELQKQVRRLIQRKEEILSSFSRQGELTSLPKQRKGDIGQSLPTVSASRVDDREVVIQISTFKFKRSRLSQVLLNLEGEDLQILNASVFASFGDRVFYNLHLQVNGTQKMECEVLSEKLLSLCEGEELFP* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00528 254 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 64 246 - -
Eupl01g00528 254 FunFam Transcription factor ORG2 71 156 - -
Eupl01g00528 254 SMART finulus 81 133 IPR011598 GO:0046983
Eupl01g00528 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 144 IPR036638 GO:0046983
Eupl01g00528 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 127 IPR011598 GO:0046983
Eupl01g00528 254 MobiDBLite consensus disorder prediction 63 86 - -
Eupl01g00528 254 Gene3D - 71 154 IPR036638 GO:0046983
Eupl01g00528 254 Pfam Helix-loop-helix DNA-binding domain 79 128 IPR011598 GO:0046983
Eupl01g00528 254 CDD bHLH_AtORG2_like 76 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00528 Eupl-Chr1 20700076 20701897 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00528 1 251 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 44.141 2.22e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl01g00528 HLH 1.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00528 - - vvi:100262373 290.041