Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00526 ATGGCAGCCTATCTCCAGCAAACAATGGCAGCCTACCTCCAGCAAACACACGTCGACCACGATTTGACGATTTTCTACTCAACCTCCGACTCGCCACACGAATCTACGACCCCATCCTCTTCATACTACCATTCATCCCCTCCATCTCATCAATCCCAAATAACTTACCAACTGACTGTGAGAAATCTCTCTTACACCATTCATCACAAAAGCTCCATACTCACTTCACTTTTTCGCCCGGTGCAGAAGCTTAAACCCACTATTGTACTCAAGTCTGTTTCTTTCACCGCGAGGAGCTCGGAGATCCTTGCAGTTGTTGGTCCTAGTGGTGCTGGGAAGTCGACCCTTCTTCGGATCATCTCTGGTCGGATAAGAAACAAGGAATTTGACCAGAAAAGTTTATCACTTAATGATCATCCAATAACTAGTCCAACTCAATTGCGGAGGATATGTGGGTTCGTCGCTCAGGAAGACAATTTACTTCCTCTCCTCACTGTCAAGGAAACACTGATGTTCAGCGCCAAGTTTAGGCTTCGAGGGTTGAATTCGAAAGAGAAGGAAGAGAAGGTTGAGAGCCTGATGCAAGAGCTGGGTCTTGTGAATGTAGCAGATAGTTTTGTTGGAGATGAAGAGACAAGAGGAATATCAGGTGGAGAACGAAAGCGGGTGTCGATAGGGATCGATGTGATCCATGACCCACCGATTCTACTGCTTGATGAGCCGACGTCAGGCCTAGACAGCAAATCAGCCTTTCATGTGATCGAGCTACTTTCCTCCATGGCAAAAGCAAAGCAAAGAACTGTAGTTCTAACCATCCACCAACCTAGCTATATGATTCTTCAACACATCTCTAACTTCTTGCTCCTCTCTCGTGGATCAGTCATCCACAACGGTAGCCTTGAAGTGCTCGAGGAAACTATAACCAAAATGGGATTCAAAATCCCAGAGCAACTAAACGCTCTAGAATTCGCCCTGGAGATTATCAGGCCGTTGGAAGATTCAAATTCGAAAAACTATCTGTTGGATGAAGATGACAAGGAAATATCTTCTTACTCAATATGGCCAGGAGAGGAAGTCGTTCAACAAGACGCTGATAATAAACAAACGGGCTGTGGTTATTGTTGGAGACTTGTTGAGGTAATGTCTCTTTGTTTGAGATTTTGGAAGATCATTTATAGGACGAAGCAGCTTTTCTTGGCAAGAACGATGCAAGCAATTGTCGGCGGTTTCGGGTTGGGTAGTGTTTATTTCAAGGTGACGACTGATGAAGAGGGAGTCGCCGAGAGGTTGGGTCTGTTTGCTTTCAGTCTTAGTTTTCTCCTTTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGCGGCGTGTTTTAATGAAAGAAGCTTCGAGGGGGGCGTACAAGGTTTCTTCTTACATGGTTGCTAACACTATGATCTTTGTGCCCTTCTTGCTTGCCGTGGCTATTCTTTTTGCCATCCCAGTTTACTGGCTCGTCGGACTTAATCCTTCCTTCGCTGCTTTCGCGTTCTTTGTTTTCATAGTTTGGATGATTGTGTTGATGGCTAGTTCCCTAGTACTCTTTCTAAGTGCAGTCTCTCCCGACTTCATTTCTGGGAATTCGCTCATATGCACAGTTTTAGGAGCCTTCTTCCTCTTCTCAGGCTATTTCATTCCAAAGGAGAACATCCCAAAGTATTGGATCTTCATGTACTATGTCTCTCTTTACAAATATCCCTTGGATTCCCTACTCATCAATGAATACTGGAGTGTGAAAGAGAAGTGTTTTTCTTGGCAAGCTCAAGATCATTCGAATTGTACGCTCACAGGTTCAGATGTTCTGAGGATTAGAGGACTAGAGAAGGACACAAGGTGGATGAATGTGGGGATCATGTTTGGTTTCTTCTTGTTTTATCGTGTGCTTTGTTGGATAATTCTTGCTCGAAGGGCTTCGAAAACACTGCTATAA 1968 0.4431 MAAYLQQTMAAYLQQTHVDHDLTIFYSTSDSPHESTTPSSSYYHSSPPSHQSQITYQLTVRNLSYTIHHKSSILTSLFRPVQKLKPTIVLKSVSFTARSSEILAVVGPSGAGKSTLLRIISGRIRNKEFDQKSLSLNDHPITSPTQLRRICGFVAQEDNLLPLLTVKETLMFSAKFRLRGLNSKEKEEKVESLMQELGLVNVADSFVGDEETRGISGGERKRVSIGIDVIHDPPILLLDEPTSGLDSKSAFHVIELLSSMAKAKQRTVVLTIHQPSYMILQHISNFLLLSRGSVIHNGSLEVLEETITKMGFKIPEQLNALEFALEIIRPLEDSNSKNYLLDEDDKEISSYSIWPGEEVVQQDADNKQTGCGYCWRLVEVMSLCLRFWKIIYRTKQLFLARTMQAIVGGFGLGSVYFKVTTDEEGVAERLGLFAFSLSFLLSSTVEALPIYLQERRVLMKEASRGAYKVSSYMVANTMIFVPFLLAVAILFAIPVYWLVGLNPSFAAFAFFVFIVWMIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKENIPKYWIFMYYVSLYKYPLDSLLINEYWSVKEKCFSWQAQDHSNCTLTGSDVLRIRGLEKDTRWMNVGIMFGFFLFYRVLCWIILARRASKTLL* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00526 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 58 316 IPR003439 GO:0005524
Eupl01g00526 655 MobiDBLite consensus disorder prediction 29 48 - -
Eupl01g00526 655 FunFam ABC transporter G family member 23 81 314 - -
Eupl01g00526 655 Pfam ABC-2 type transporter 380 588 IPR013525 GO:0016020|GO:0140359
Eupl01g00526 655 SMART AAA_5 99 293 IPR003593 GO:0016887
Eupl01g00526 655 Pfam ABC transporter 90 243 IPR003439 GO:0005524
Eupl01g00526 655 Gene3D - 57 336 IPR027417 -
Eupl01g00526 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 36 640 - -
Eupl01g00526 655 ProSitePatterns ABC transporters family signature. 215 229 IPR017871 GO:0005524|GO:0016887
Eupl01g00526 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 85 307 IPR027417 -
Eupl01g00526 655 Pfam ABC-2 type transporter 273 336 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00526 Eupl-Chr1 20675789 20677983 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00526 85 303 Calmodulin-binding Proteins AT2G36910 28.378 7.12e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00526 K05681 - vvi:100243136 940.643