Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00521 ATGGGTATGGTGGGTCTTCGCGGCGACGTCCTAGTTGTAGCTCCAGCCTCGTCTTTCCATCACAACCAACACCCCCACGAACCCATCCTCGACCATCATCACCACCCTCACCACCCTCACCACTTAAACAATTCAAACGCAGCCACCGCTCTCGGCGTTGGTGTTATTCCTCTCCTCACCGCTGCTCCTTGTCTTGCCCCAGCTAATATTGGTGTCGACGATGGAGATAGTAATCGAAGTCGTGGTGGTGGAATTCAGTTATGGCAAAACCAGCAATCTTACCTGAAGAAACCCATGATGATCGATCATAATAATTCAGCGAATTTTCTCAACACTAGCAGTGGTGGTGTTGGGATTGGTGGGACGACATCGAGTACATCGGTTACAACGTGCCAAGACTGTGGTAATCAGGCTAAGAAAGACTGTAGTCACCGACGGTGCAGGACCTGTTGCAAGAGTCGTGGCTTTGATTGTGCTACTCATGTTAAGAGCACATGGGTCCCCGCAGCTCGTCGGCGCGAACGTCAACTCTCCGCTGGTGCTGTTCCTCCTGGTTCTTCCGGCTCTACTTCTGCTGTTAAGAAACCTAGGCTCATCACCTCGCAAACTACAACTGCCTCTCACACTTCCACATCAAACACTACTCCCCCTCGAAGCTTTGATACTAGCTCTAGTCACCAAGATGCAAGTTTCCGTGAGACATTGCCGGGACAAGTCCGTGCACCGGCGGTTTTCAAGTGTGTTCGCGTGACCGCTATCGACGACGGGGAAGACGAGTACGCCTACCAGGCAGTCGTGAAGATTGGCGGGCATTTGTTCAAGGGTTTTCTATATGATCAAGGGGTTGATGAGAGAGATGGGTTTCCAAACATCTCAGAGCTGCATTTGGGAGGTAGTAGTGGAGGTGGTGGAAGGAATGGGGCTTCTTCTTCGTCTCCAATTATCGACCCATCTGATGTTTACGCCGCATCCGGTGGTGGATTACTTGGAGGAGAGGTTCATTGGTGGGATGGCAGGCCGACTTTTCTCAAGAAGTTAGAGGAGCCGGATAGGCCTTACTACCGATTTGCTAGTGTTTTCCAGGGGTTGGTTGAGGGGTTGCCAACTTAG 1110 0.5144 MGMVGLRGDVLVVAPASSFHHNQHPHEPILDHHHHPHHPHHLNNSNAATALGVGVIPLLTAAPCLAPANIGVDDGDSNRSRGGGIQLWQNQQSYLKKPMMIDHNNSANFLNTSSGGVGIGGTTSSTSVTTCQDCGNQAKKDCSHRRCRTCCKSRGFDCATHVKSTWVPAARRRERQLSAGAVPPGSSGSTSAVKKPRLITSQTTTASHTSTSNTTPPRSFDTSSSHQDASFRETLPGQVRAPAVFKCVRVTAIDDGEDEYAYQAVVKIGGHLFKGFLYDQGVDERDGFPNISELHLGGSSGGGGRNGASSSSPIIDPSDVYAASGGGLLGGEVHWWDGRPTFLKKLEEPDRPYYRFASVFQGLVEGLPT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00521 369 NCBIfam LRP1 C-terminal domain 235 282 IPR006511 -
Eupl01g00521 369 MobiDBLite consensus disorder prediction 20 45 - -
Eupl01g00521 369 Pfam Domain of unknown function (DUF702) 129 283 - -
Eupl01g00521 369 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 17 324 IPR007818 GO:0003700|GO:0006355
Eupl01g00521 369 NCBIfam putative zinc finger domain, LRP1 type 130 172 IPR006510 -
Eupl01g00521 369 MobiDBLite consensus disorder prediction 182 232 - -
Eupl01g00521 369 MobiDBLite consensus disorder prediction 177 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00521 Eupl-Chr1 20590518 20601695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00521 1 320 C2H2 Transcription Factor Family AT5G12330 52.870 2.44e-90 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Eupl01g00521 DUF702 5.3e-61 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00521 - - nnu:104611326 463.381