Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00514 ATGGGCATGGCAACAACAGCCCAATTTCATGTTTTAGCAGTAGATGACAGCATCATAGACAGAAAGTTGATCGAGAGGCTCCTCAAGACCTCATCTTATCAAGTTACTACAGTTGATTCTGGAAGTAAGGCTCTGGAGTTTCTGGGTTTGCAGGAGGATGACCAGAGAAACCCAAACCCACTTTCTGTTTCTTCAGACCTTCATCAGGAAATGGAGGTGAATCTGATAATTACAGACTACTGTATGCCTGGAATGACAGGCTATGATCTTCTCAAAAAAATAAAGGAATCTTCATCTCTGAAAGACATACCTGTTGTAATCATGTCCTCTGAGAATGTACCTTCAAGAATTAGCAGATGCTTAGAAGAAGGAGCAGAGGAGTTCTTCCTGAAACCAGTACGGTTATCAGATGTGAGCAAGCTTAGGCCCCATCTACTTAAGGGGAAATCAAGAGAAGAACAAGTGCAACAGCCACCACCACAGCAACAACCCAACAACAAGAGAAAGGCCATGGAAGAAGGGCTTTCACCAGAGAGGACAAGACCAAGATACAGTGGATTGACAGTGGTCTGA 573 0.4363 MGMATTAQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLQEDDQRNPNPLSVSSDLHQEMEVNLIITDYCMPGMTGYDLLKKIKESSSLKDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDVSKLRPHLLKGKSREEQVQQPPPQQQPNNKRKAMEEGLSPERTRPRYSGLTVV* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00514 190 MobiDBLite consensus disorder prediction 147 190 - -
Eupl01g00514 190 CDD REC_typeA_ARR 11 141 - -
Eupl01g00514 190 SMART REC_2 9 142 IPR001789 GO:0000160
Eupl01g00514 190 Gene3D - 10 186 - -
Eupl01g00514 190 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 165 IPR045279 GO:0009736
Eupl01g00514 190 MobiDBLite consensus disorder prediction 154 169 - -
Eupl01g00514 190 FunFam Two-component response regulator ORR5 9 148 - -
Eupl01g00514 190 SUPERFAMILY CheY-like 9 158 IPR011006 -
Eupl01g00514 190 Pfam Response regulator receiver domain 11 138 IPR001789 GO:0000160
Eupl01g00514 190 ProSiteProfiles Response regulatory domain profile. 10 146 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00514 Eupl-Chr1 20322997 20324785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00514 1 188 Response Regulator Gene Family AT3G57040 56.710 2.04e-87 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl01g00514 Response_reg 4.2e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00514 K14492 - nnu:104611310 294.664