Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00513 ATGCAAGAATCCTGCGATGGGCAATCTGGAGAGGAGAAAGCCCTACCTGAGAATATCAAGAAAAGAAGGCTGAAGACACCATCCCAGGTTGAGGCTTTAGAGAAACTTTATAATGAACACAAATTTCCCACCGAGTTAATGAAATCACAGCTTGCAGAGGATATAGGATTGTCAGAGAAGCAGGTTTCTGGATGGCTTTGCCACAGAAGGTTGAAAGACAAAAAGCTGTTGAGAGATGAAGTGTGTGCAAATGGCAGACAAGATTTTTCAAGTGGTGTTGTACAGGATCGTGGCAGTGGACTTAAGCAGGATTCATGTAGCAGCACCAAACAAGGGGAATATAGGCATTTTGATCCAAGGGAGGTAGAAAGTCAAAGGTTCTATGGACAAAATTATCCACCTGCTGACCTAACTTATGTAAATCGGGGTCAATATATGCGTACTGGAAATTACAGTGCCATGGACAATACTTCATCAGGAAGTAGCTCAGCTTCACGAGAAAGACTGTTTCCGCAGAGTGAGGATCCTTATGATATCGAGCCCTTGAGGTATTCTTCTCGGAGTCGCAACTATATGTTGATGAATACCGAGGGTGTAAAAAACAGGGAATATATGAGGGCATCGGGACATTTACAATTGCAGGATGAGATTGAAAATGCTGCTATTTCTGCAGTTAAGAGGCAACTGGGGAGGGATTACCAGGTAGATGGTCCACCACTTGGTATCGAATTTGAGCCACTTCCTCCTGGTGCATTTGATTCACCAATTAGGGATCCAATCCATGAACCCTACTATGTTGGTGACCCCATCTTGCAGAGCTCACACAGTGTCCCGAGAGCTCGTAAGCAACCCAGCATTGACACAAGGTATGACAAATACAATTGCCAGATGCATCCTCAAGTTAAACATCCTGAAGGAGCATATTTTAAACAAACAATGTGGGAGTCTGATCGTCAGGATGAGTACAGCAGCTACCCGTCATTGCAAAGGTCTTCTTTCACAAGTAATGGAAATCATGCCCCTGACCGGAACTCTGCCATGGATAATATCGATGAAGATTCTGCTGGGGAAGATTCTGTGTTTAACAACAGCAGGAACTACGGGATGAGGTCTAAGCATGGTGTAGAAGGGATGAGATCAGATTCCATCACAGACCATCATCTTCGTCCATATGGTGGAGAAGTTATTACCAGTGTATCCTATCCTCGGCTACATAACTATAGTAATACCAGACCTCATGTGGGCCAAAGGAGAGAATATTTCGAGTCTAAACCTTCGAATTTGATACTTCAGCGCAGCGAGTCTCTTGATACAGAGGACAGAGGGCAGCCTAGAAGGATTGCAAAAGTTCCGGAGGAAAAGATTTACAGAGAAATGAGAATGAGTAAAGAGTACGGCAATCCGTTGAGAGTAAAGGTGCAACCAAAAATTCAAATGAGAGGGGGTAGAATATTGCGAGGTGATGAATTTCTGCCGCAGGGTTATGTTTCGAAACCACCATCACCACAGGCATTGCTTCCGCGGACAAACCAGATCAAAGGGTCTGCTGGAGAGATGCCAACCAGCTTTAGTGAGGATGAAACTACAGCATCCAGTTCTTCTATGGACTGA 1611 0.4438 MQESCDGQSGEEKALPENIKKRRLKTPSQVEALEKLYNEHKFPTELMKSQLAEDIGLSEKQVSGWLCHRRLKDKKLLRDEVCANGRQDFSSGVVQDRGSGLKQDSCSSTKQGEYRHFDPREVESQRFYGQNYPPADLTYVNRGQYMRTGNYSAMDNTSSGSSSASRERLFPQSEDPYDIEPLRYSSRSRNYMLMNTEGVKNREYMRASGHLQLQDEIENAAISAVKRQLGRDYQVDGPPLGIEFEPLPPGAFDSPIRDPIHEPYYVGDPILQSSHSVPRARKQPSIDTRYDKYNCQMHPQVKHPEGAYFKQTMWESDRQDEYSSYPSLQRSSFTSNGNHAPDRNSAMDNIDEDSAGEDSVFNNSRNYGMRSKHGVEGMRSDSITDHHLRPYGGEVITSVSYPRLHNYSNTRPHVGQRREYFESKPSNLILQRSESLDTEDRGQPRRIAKVPEEKIYREMRMSKEYGNPLRVKVQPKIQMRGGRILRGDEFLPQGYVSKPPSPQALLPRTNQIKGSAGEMPTSFSEDETTASSSSMD* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00513 536 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Eupl01g00513 536 MobiDBLite consensus disorder prediction 503 536 - -
Eupl01g00513 536 SUPERFAMILY Homeodomain-like 16 78 IPR009057 -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 491 536 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 151 180 - -
Eupl01g00513 536 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 536 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 1 26 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 93 108 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 151 169 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 93 113 - -
Eupl01g00513 536 MobiDBLite consensus disorder prediction 320 343 - -
Eupl01g00513 536 Pfam Homeodomain 20 75 IPR001356 GO:0003677
Eupl01g00513 536 SMART HOX_1 18 80 IPR001356 GO:0003677
Eupl01g00513 536 MobiDBLite consensus disorder prediction 320 377 - -
Eupl01g00513 536 CDD homeodomain 20 75 IPR001356 GO:0003677
Eupl01g00513 536 Gene3D - 14 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00513 Eupl-Chr1 20293456 20311345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00513 3 536 Homeobox Transcription Factor Family AT4G03250 37.681 4.71e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Eupl01g00513 Homeodomain 3.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00513 - - tss:122643101 687.567