Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00497 ATGTCTAATTGTGATTTGAAGAGGAAAATGAAGGTTGGTTGTTCGTTGTTAGTGTTAGGAACAAGTAGTGGTGGTGTTATAGCATTGGATGTGTCTTCTGGTTCAAGATGGGCTAGCGTGAATCCGGGAATCTTCATATGCATGCAGTGTTCCAGAATCCATAGAAGTCTTGAAGTACACATATCAAAGGTTAAAAAACAAGCCAACCCAAAACAGTGGTATTTAATCAATTAA 234 0.3803 MSNCDLKRKMKVGCSLLVLGTSSGGVIALDVSSGSRWASVNPGIFICMQCSRIHRSLEVHISKVKKQANPKQWYLIN* 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00497 77 Pfam Putative GTPase activating protein for Arf 33 66 IPR001164 GO:0005096
Eupl01g00497 77 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 34 65 IPR044520 GO:0005096
Eupl01g00497 77 SUPERFAMILY ArfGap/RecO-like zinc finger 34 66 IPR037278 -
Eupl01g00497 77 Gene3D Arf GTPase activating protein 28 74 IPR038508 -
Eupl01g00497 77 ProSiteProfiles ARF GTPase-activating proteins domain profile. 1 77 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00497 Eupl-Chr1 19882320 19890419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00497 32 64 C2H2 Transcription Factor Family AT4G05330 57.576 3.58e-08 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00497 K12486 - apan:127262389 61.2326