Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00477 ATGAACAGGTTGACCAACTCCCTAGTCTCTCGTCCGTCAATTTGTGGTCTCTTACTCTCGTGGGTCTTGGCTCTTTCTCTCCCTCTCTCGATCACGGAGAGAATCAACATGGCGTCAGCGAAGGTCGGCCACAGGGAATCCATGATAAACAACTCCTTCGTGTGCTATCGACCAAAGCATATCACTTCAAATGGTATCCAGTATTTGCACAAATCCGAATCCATTCTCGAATACTCGTTTCCACTTCTCATATTGCAGGGGCAAAATCTGGAAAACTGCGATTTTCTAAGCGTAATGTTCAACGAGAAAAGCACCGATGTACTCTTACACCTTGCAACTATGGGCTTCGTGTTTCGTGTATTCGCACTTGGAGTGAAGATGGACCTAAGCATTATATGGACACCAGGGATAAAGTCGATTGCTATTGGTGGTTTAGGCGTCATCATTCCGGCCATATTGGCCGATGCCCTTGTTAAGTTCCTAATCAGTATTTTAAAGTTGGGCCCTGAATTCAAACATAATGGATTGGATTTAGGAGCACAAGCATTAGCTAAGACTTTATTTCCCGTTGTTTCAATCCTACTGACAGAGCTCAAGATGCTCAATTCGGAGCTCGGCCGCCTCGCATTGTCTTCAGCAATGGTCTCGGAACTACTCGGCCTTATTATGTTAGTGGGCATGGCTACAGTTGACCAACTCGATCCCTATTCTCTCGTCCGTCAATTTGTGGTCTCTTACTGTCTTGGGTCTTGGCTAGCTCTTTCTCTCTCTCTCTTGATCACGGAGAGAATCAACATGGCGTCAGCGAAGGTCGGCCACAGGGAATCCATGATAAACAACTCCTTCGTGTGCTATCGACCAAGGCATATCACTTCAAATGGTATCCAGTATTTGCACGAATCCGAATCCATTCTCGAATACTCGTTTCCACTTCTCATATTGCAGACTGGAATTATACTAGGTCGATCACTGCTGGGGGAAAAGCAGGAAAACTACGATTTTCTAAGCGAAATGTTCTACCAGAAAAGTACCGAAGTACTCTTTCACCTTGCAGTTATGGGCTTCATGTTTCGTGTATTCGCAATTGGAGTGACGATGGACCTAAGCATGATATGGACATCAGGGATAAAGTCGATTGCTATTGGTGGTTTAGGCGTCATCATTCCGGGCATATTGGCCGATGCCCTTGTTAAGTTCCTAATCAGTATTTTAAAGTTGGGCCCTGAATTCAAACAAAATGGATTGGATTTAGGAGCACAAATATTAGCTAAGACTTTATTTCCCGTTGTCTCAATCCTACTGACAGAGCTCAAGATGCTCAATTCGGAGCTCGGTCGCCTCGCATTGTCTTCAGCAATGGTCTCGGAACTACTCGGCCTTATTATGTTAGTGGGCATCCTTACAGTGATGTTCTCGGACAAAACCCAACATAAGATTAG 1439 0.4482 MNRLTNSLVSRPSICGLLLSWVLALSLPLSITERINMASAKVGHRESMINNSFVCYRPKHITSNGIQYLHKSESILEYSFPLLILQGQNLENCDFLSVMFNEKSTDVLLHLATMGFVFRVFALGVKMDLSIIWTPGIKSIAIGGLGVIIPAILADALVKFLISILKLGPEFKHNGLDLGAQALAKTLFPVVSILLTELKMLNSELGRLALSSAMVSELLGLIMLVGMATVDQLDPYSLVRQFVVSYCLGSWLALSLSLLITERINMASAKVGHRESMINNSFVCYRPRHITSNGIQYLHESESILEYSFPLLILQTGIILGRSLLGEKQENYDFLSEMFYQKSTEVLFHLAVMGFMFRVFAIGVTMDLSMIWTSGIKSIAIGGLGVIIPGILADALVKFLISILKLGPEFKQNGLDLGAQILAKTLFPVVSILLTELKMLNSELGRLALSSAMVSELLGLIMLVGILTVMFSDKTQHKI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00477 479 Pfam Sodium/hydrogen exchanger family 103 259 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl01g00477 479 Pfam Sodium/hydrogen exchanger family 310 471 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Eupl01g00477 479 Gene3D - 310 478 IPR038770 -
Eupl01g00477 479 Gene3D - 87 284 IPR038770 -
Eupl01g00477 479 PANTHER CATION/H + ANTIPORTER 95 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00477 Eupl-Chr1 19196123 19205970 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00477 274 475 Antiporter Super Family AT2G13620 29.310 4.27e-17 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00477 K26731 - rcu:112535524 105.916