Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00454 ATGGCAGGAATGGTTCAAGATGAGGGATCATCGTCTTCATCACCTCTTCAGATCTTCTCCTTGATGTCGCTTTCCCCTAGTTTAGGATCCCCATGGCTTCGGGAGATGAAGTCGGAGGAGCGAGGGTTATATCTAATCCACCTCCTTCTCTCCTGTGCTAACCATGTCGCTGCGGGTAGCCTTGAGAATGCGAACATTGGCCTCGAGCAAATTTCCCACCTTGCCTCTCCCGATGGTGATACCATGCAGCGCATTGCCGCCTACTTCACTGAGGCACTCGCAGACCGGATTCTCAAAGCTTGGCGTGGTGTGCACAAAGCCCTCAATTCCACAAGGATATCATCTGTCTCTGAAGGAATTCTTGTTCGGAGATTGTTCTTCGAGCTCTGCCCCTTCGTAAAGCTTGCATTTGTGATCACAAACCAAGCAATTATAGAAGCCATGGAAGGGGAGAAGATGGTCCACATCATCGATCTCAATTCAGCAGAGCCTGCGCAGTGGATTGCGCTCCTTCAGGCCTTGAGCGCACGGCCGGAAGGTCCACCCCATTTAAAAATTACAGGCATTCATGAACAGAGAGAAGTGTTGGAACAAACAGCTCTTCAATTGACCGAAGAAGCTGAGAAATTGGATATCCCATTTCAATTCAATCCTATAGTTAGCAAATTAGAGAATCTCGATGTCGAAAGTCTGCGTAGGACTGGAGAAGCTGTAGCAATAAGCTCCATCCTCCAATTGCATTCCCTCTTGGCATCTGACGATGAAACCCTTCGGAATAAATCCTCACCGGCATCCAAGAATTCAAATTCTGTTCACCTTCAGAGAGTCCTGCAGATGAACCAGGGTACTTTAGGTGAATTGCTTGAGAGAGATTTGAGCAATGGGTACGGTCCAAGTCCTGATTCGGCGTCATCCTCACCACTATCTTTACCTACTTCACCAAAGATGGAGAGATTTCTTACTGCTCTGTGGGGTCTATCACCAAAGCTCATGGTTGTCACAGAGCAAGAATCGAACCATAACGGGTCAACTCTGATGGAAAGGCTCTTGGAAGCACTGTATTTCTACGCATCACTCTTTGATTGCTTGGAATCAACAGTAACAAGGGCATCAATGGAGCGAATTAAGGTGGAGAAGATGCTGTTTGGAGAGGAAATTAAGAACATTATAGCTTGTGAGGGAGCCGAGAGGAAGGAGAGACATGAGAAGCTCGAGAAGTGGCTTCAGAGGTTCGACTGTGCCGGATTCGGAAGGGTGCCATTGAGCTACTTTGGTCTGTTGCAGGCAAGGAGGTTGTTGCAGAGCTATGGTTGTGATGGATATAAGATCAAGGAGGAGAATGGGTGTTTGGTAATTTGCTGGCAAGACCGAGCCCTTTTTTCGGTTTCAGCTTGGAGGTGTAGGAGGTATGATTGA 1416 0.476 MAGMVQDEGSSSSSPLQIFSLMSLSPSLGSPWLREMKSEERGLYLIHLLLSCANHVAAGSLENANIGLEQISHLASPDGDTMQRIAAYFTEALADRILKAWRGVHKALNSTRISSVSEGILVRRLFFELCPFVKLAFVITNQAIIEAMEGEKMVHIIDLNSAEPAQWIALLQALSARPEGPPHLKITGIHEQREVLEQTALQLTEEAEKLDIPFQFNPIVSKLENLDVESLRRTGEAVAISSILQLHSLLASDDETLRNKSSPASKNSNSVHLQRVLQMNQGTLGELLERDLSNGYGPSPDSASSSPLSLPTSPKMERFLTALWGLSPKLMVVTEQESNHNGSTLMERLLEALYFYASLFDCLESTVTRASMERIKVEKMLFGEEIKNIIACEGAERKERHEKLEKWLQRFDCAGFGRVPLSYFGLLQARRLLQSYGCDGYKIKEENGCLVICWQDRALFSVSAWRCRRYD* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00454 471 Pfam GRAS domain family 45 466 IPR005202 -
Eupl01g00454 471 MobiDBLite consensus disorder prediction 290 311 - -
Eupl01g00454 471 MobiDBLite consensus disorder prediction 297 311 - -
Eupl01g00454 471 ProSiteProfiles GRAS family profile. 36 466 IPR005202 -
Eupl01g00454 471 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 37 462 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00454 Eupl-Chr1 18467188 18469617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00454 1 469 GRAS Transcription Factor Family AT1G50420 67.635 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl01g00454 GRAS 3.9e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00454 - - psom:113322722 785.408