Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00426 ATGGCAAAGAAGAAGAGTTTGTTTAATCTGGTGAAGAGACTGTTTATTTCAGAAGCAAAAGCTAAGTCAGAAAAGAGGGAAAAGAGGTGGAGATGGATTTTTGGAAGGTTCAAGCTGAAACGCCTGGCCTCACTTTCAGCACCATCACCAGTTAAGGAGAGGACATTGATTGAAGCAGAAGAAGAGCATAGTAAGCATGCCTTGACTGTTGCCATTGCAACAGCAGCAGCTGCTGAAGCTGCTGTGGCAGCTGCCGAGGCTGCGGTTGAGGTTGTCCGTCTCACTGGCACTCCTCGGTCCTACCATTATACTGAGAGGGGTATCCGAAATTTGGCTGCAATTAAAATTCAAACCGCCTTCCGGGGGTATCTCGCAAGGAAAGCGTTGCGGGCATTGAAGGGACTGGTGAAGCTTCAAGCTATGGTTCGAGGCCGAGCTGTGAGGCGTCAAGCAATCACCACTCTCAAGGGATTGCAGTCCCTAGTAAAGATCCAGACACAGGTTCGCGCAAAGAGAGTCAAAATGGTGGAGAAAAGCCAGATTGTTGAAGAAAAGAAACAGTTGCTTAGGCATAACATGGAATTGGGAGATAAGGAAACAAGTGTAGGTGGAAAATTATCTCTTCAACTCGATCTGAACATTCAGAGAAAGTGGGATGACAGTTTGGAGTCGAAGGAAGAGATGAATTCCATATTCCTAAGCAGGCAGGGGTCCTTGATCAAGAGAGAACACATAAAGGAATACTTGTTTAGCAATCGGGAGAGGAGGAACATTCAGAGTCTAATAGAATCAGAACCAAATAATGTAAATGGGAGATTGAGCCATTGGTTAGAACAATGGGTGGATGCTCAAGAAAGGAAAAGGCAAGGACCAGGTAATTTGGATTCAGTTGTGTTTTCAAATCAAATGCACAGAGACATAGAGGGACAAAAAGAATTTAGACTCAGAGAATTACAAACAGATGAACAGTTAGAAGGAATGGATTCCCCAAGATCATTCCGAAGGAGATCATTTCATCAACCAAAAAGGAGTTGGATTCCAGAAAATGATTCCTTCTCAAGCTCTTCTGCCATTCCAAATTACATGTCGGCGACAGAATCTGCCAAGGCAAAGGCAAGATCAATTAGCATGCCAAAGCAAAGACTAGGAGTCCTGGAAACTTATTCTGATCATGGCTCACCATCTAAGAACAGATTTGCTTCTTTCTCTTCTATTAGTAGTGATGCAACTAGCATTGGTAAAATTGTCAAGCCTCCCAGTTCTCAACAGAGATCTCCACGCATGAAAGGTCTATCAGGTCCTATAAAATCACACCGAACTTTGAAAGATCGAAGCTTTGATTCGGAATGTTCGTTGCTGAATTGGGATCAACAAAGTGCATTTAGATGA 1389 0.4348 MAKKKSLFNLVKRLFISEAKAKSEKREKRWRWIFGRFKLKRLASLSAPSPVKERTLIEAEEEHSKHALTVAIATAAAAEAAVAAAEAAVEVVRLTGTPRSYHYTERGIRNLAAIKIQTAFRGYLARKALRALKGLVKLQAMVRGRAVRRQAITTLKGLQSLVKIQTQVRAKRVKMVEKSQIVEEKKQLLRHNMELGDKETSVGGKLSLQLDLNIQRKWDDSLESKEEMNSIFLSRQGSLIKREHIKEYLFSNRERRNIQSLIESEPNNVNGRLSHWLEQWVDAQERKRQGPGNLDSVVFSNQMHRDIEGQKEFRLRELQTDEQLEGMDSPRSFRRRSFHQPKRSWIPENDSFSSSSAIPNYMSATESAKAKARSISMPKQRLGVLETYSDHGSPSKNRFASFSSISSDATSIGKIVKPPSSQQRSPRMKGLSGPIKSHRTLKDRSFDSECSLLNWDQQSAFR* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00426 462 ProSiteProfiles IQ motif profile. 109 137 IPR000048 GO:0005515
Eupl01g00426 462 SMART iq_5 108 130 IPR000048 GO:0005515
Eupl01g00426 462 MobiDBLite consensus disorder prediction 410 428 - -
Eupl01g00426 462 Pfam IQ calmodulin-binding motif 112 130 IPR000048 GO:0005515
Eupl01g00426 462 ProSiteProfiles IQ motif profile. 133 160 IPR000048 GO:0005515
Eupl01g00426 462 Pfam Protein of unknown function (DUF4005) 343 421 IPR025064 -
Eupl01g00426 462 PANTHER IQ-DOMAIN 5-RELATED 22 398 - -
Eupl01g00426 462 MobiDBLite consensus disorder prediction 410 442 - -
Eupl01g00426 462 Gene3D - 109 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00426 Eupl-Chr1 17589703 17595017 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00426 1 462 IQD Protein Family AT5G13460 36.907 9.62e-76 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00426 - - nnu:104608897 477.248