Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl01g00424 ATGGAGAGGTACTTGAGAGAGAACTTCGAAGTTCAACCTAAGAACTCCTCCGAAGAGGCTCTGAGGAGATGGAGATCCGCAGTTTCGATTGTCAAGAATCCTCGAAGGAGGTTCCGGATGGTAGCAGATCTGGTCAAGAGATCCGAAGCCAAACAGAAGAAGCTTAAAATCCAGGAAAAAATACGAGTCGCTTTATACGTTCAAAAAGCAGCCCTCCAGTTCATCGACGCTGGTAATAGCGTCGTACACGAGGTTTCGGAAGAGGTTAGGCAGGCCGGTTTTGGCATTGGTCCAAATGATCTTGCAGCCATTGTTCGTGGCCATGATTCCAATGGCTTGAATATCCATGGAGGAGTCGAAGGAATTGCGAGAAAAGTCCTCGTATCGCTTGATGATGGTGTAAGTGAAGAAGAACTACCTCTCAGGCAGAAGATCTTTGGCTTAAACCGATATGTTGAGAAACCTTCTAGAAGTTTCTTGATGTTTGCATGGGAGGCGCTGCAGGACTTAACTCTTATCATCCTCATGGTCTGTGCTGTGGTTTCTATAGGTGTTGGAATAGCCACCGAAGGGTGGCCAAAGGGTATGTATGACGGATTGGGAATCGTACTCAGTATTCTCTTAGTAGTGATGGTTACTGCAATCAGCGACTACAAGCAGTCCTTGCAATTCAAGGACTTGGACAAGGAGAAGAAGAAGATTTTCCTTCAGGTCACTAGAGATGGATATAGACAGAAGGTCTCTATCTATGACTTGGTGGTTGGAGACATTGTTCATCTCTCCATTGGAGACCAAGTTCCAGCTGATGGGATATTTATATCAGGTTATAGTTTGTCAATTGACGAGTCAAGCTTGTCAGGCGAGAGTGAGCCCGTGAATGTATTCAAAGAGAAGCCTTTCCTTCTATCGGGGACCAAAGTGCAAGATGGGTCTGGAAAAATGCTGGTTACGTCAGTTGGAATGAGGACTGAATGGGGAAGGTTGATGGAGACTTTGAGTGAGGGAGGAGAAGATGAGACACCACTACAGGTGAAGCTTAATGGTGTTGCCACCATTATTGGAAAGATTGGTTTGTTTTTCGCTGTGCTGACATTTGTGGTTTTGACAGCAAGGTTTCTAGTGGAGAAGTCACTTCACAATGAGTTCTCAGAATGGACTTCAGATGATGCAATGTTGCTCCTTGATTATTTTGCAATAGCAGTGACTATAATTGTGGTTGCAGTTCCAGAAGGGCTACCATTGGCAGTGACATTGAGTCTGGCCTTCGCAATGAAGAAATTAATGAAAGATAAGGCACTAGTGAGGCATCTCTCAGCATGTGAAACCATGGGTTCTGCTTGTTGCATATGCACGGATAAAACAGGGACTCTGACAACCAACCATATGGTGGTTGATAAGATATGGATTAATGAAGAAACTACAGTGATAAAAGGTAAAGACAGTGGAGATACCTTGAAATCTGCCATCCCTGAGAGAATTTTGAGCATCCTTTTGCAGTCTATATTTCAGAACACTGGTTCTGAGGTGGTGAAAGGCAAAGATGGAAAGAATAACATTTTGGGAACTCCAACAGAGTCGGCATTGTTAGAATTTGGCTTGCTTTTGGGGGCTGATTTTGAGACACAACGCCGGGAGTCTCAGTTATTGAAGGTTGAGCCTTTCAATTCAGTCAGGAAGAAGATGTCTGTGATTGTGTCTCTTCCAGCTGGTGGGTTCCGAGCGTTCTGCAAAGGCGCATCAGAAATCATTTTAGGAATGTGCGACAAGATTGTTGATAGCAACGGAGAATCTGTTCTTCTATCAGAAGCACAGATAAAGAATGTCACAGATATCATTAATGGTTTTGCCAATGAAGCTCTGAGAACTCTCTGCTTAGCTTTCAAAGATATGGACGAAACTTCCGATAACGATAGTATTCCAGCTGCAGGCTATACTCTGATAGCAGTTGTTGGAATTAAGGATCCAGTGCGCCCCGGAGTCAAGGATGCGGTTCAGACTTGTTTGGCTGCTGGGATTACCGTCAGAATGGTTACTGGCGACAACATTAATACAGCTAAAGCCATAGCTAAAGAATGTGGCATATTGACAAATGATGGTTTGGCCATAGAAGGACCAGATTTTCGCAGCAAAAGTCCCCAGGAGATGAAGGAGTTAATACCGAGAATTCAGGTGATGGCTCGATCGTTGCCTTTGGACAAGCACACCTTGGTGACCCATTTGAGGAATATGTTTGGAGAAGTTGTTGCTGTGACCGGCGATGGCACCAATGATGCCCCTGCTCTTCATGAAGCAGACATTGGACTTGCTATGGGTATAGCAGGAACCGAGGTTGCAAAAGAGAACGCTGATGTTATCATAATGGATGATAATTTCTCGACTATTGTGAATGTGGCCAAATGGGGCCGTGCAGTTTATATAAACATTCAAAAGTTTGTGCAGTTCCAGCTGACTGTCAATATTGTTGCTCTTATGACTAATTTTGTTTCAGCATGCCTCTCAGGATCTGCTCCTCTTACGGCCGTCCAGTTGCTGTGGGTTAACATGATTATGGACACTCTTGGTGCATTGGCACTGGCCACAGAACCTCCAAATGACGGACTGATGAAAAGACCTCCAGTTGGGAGGGAAGTGAATTTCATCACCAGATCATGTGGAGGAATATCATCGGTCAGAGTATTTATCAATTGGCAGTTCTTGCAGTTCTCAAATTCGACGGGAAGCAGCTTCTGGAACTTAGTGGATCGGATGCTGATTCTGTTCTCAATACTTTCATTTTCAATACTTTTGTGTTTTGCCAGGTATTCAATGAAATTAACAGCCGTGATATGGAGAAGATAA 2838 0.4412 MERYLRENFEVQPKNSSEEALRRWRSAVSIVKNPRRRFRMVADLVKRSEAKQKKLKIQEKIRVALYVQKAALQFIDAGNSVVHEVSEEVRQAGFGIGPNDLAAIVRGHDSNGLNIHGGVEGIARKVLVSLDDGVSEEELPLRQKIFGLNRYVEKPSRSFLMFAWEALQDLTLIILMVCAVVSIGVGIATEGWPKGMYDGLGIVLSILLVVMVTAISDYKQSLQFKDLDKEKKKIFLQVTRDGYRQKVSIYDLVVGDIVHLSIGDQVPADGIFISGYSLSIDESSLSGESEPVNVFKEKPFLLSGTKVQDGSGKMLVTSVGMRTEWGRLMETLSEGGEDETPLQVKLNGVATIIGKIGLFFAVLTFVVLTARFLVEKSLHNEFSEWTSDDAMLLLDYFAIAVTIIVVAVPEGLPLAVTLSLAFAMKKLMKDKALVRHLSACETMGSACCICTDKTGTLTTNHMVVDKIWINEETTVIKGKDSGDTLKSAIPERILSILLQSIFQNTGSEVVKGKDGKNNILGTPTESALLEFGLLLGADFETQRRESQLLKVEPFNSVRKKMSVIVSLPAGGFRAFCKGASEIILGMCDKIVDSNGESVLLSEAQIKNVTDIINGFANEALRTLCLAFKDMDETSDNDSIPAAGYTLIAVVGIKDPVRPGVKDAVQTCLAAGITVRMVTGDNINTAKAIAKECGILTNDGLAIEGPDFRSKSPQEMKELIPRIQVMARSLPLDKHTLVTHLRNMFGEVVAVTGDGTNDAPALHEADIGLAMGIAGTEVAKENADVIIMDDNFSTIVNVAKWGRAVYINIQKFVQFQLTVNIVALMTNFVSACLSGSAPLTAVQLLWVNMIMDTLGALALATEPPNDGLMKRPPVGREVNFITRSCGGISSVRVFINWQFLQFSNSTGSSFWNLVDRMLILFSILSFSILLCFARYSMKLTAVIWRR* 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl01g00424 945 Pfam Cation transporter/ATPase, N-terminus 117 182 IPR004014 -
Eupl01g00424 945 Pfam Cation transporting ATPase, C-terminus 836 883 IPR006068 -
Eupl01g00424 945 Gene3D - 460 655 IPR023299 GO:0000166
Eupl01g00424 945 PANTHER CATION TRANSPORTING ATPASE 81 884 - -
Eupl01g00424 945 Gene3D - 447 796 IPR023214 -
Eupl01g00424 945 FunFam Calcium-transporting ATPase 648 796 - -
Eupl01g00424 945 SFLD p-type atpase 432 803 IPR044492 -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 751 770 - -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 281 295 - -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 670 680 - -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 775 787 - -
Eupl01g00424 945 PRINTS P-type cation-transporting ATPase superfamily signature 648 659 - -
Eupl01g00424 945 Pfam E1-E2 ATPase 236 429 - -
Eupl01g00424 945 NCBIfam calcium-translocating P-type ATPase, PMCA-type 115 884 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Eupl01g00424 945 FunFam Calcium-transporting ATPase 460 655 - -
Eupl01g00424 945 SUPERFAMILY Calcium ATPase, transduction domain A 236 331 IPR008250 -
Eupl01g00424 945 FunFam Calcium-transporting ATPase 212 333 - -
Eupl01g00424 945 PRINTS H+-transporting ATPase (proton pump) signature 783 808 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 PRINTS H+-transporting ATPase (proton pump) signature 608 626 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 PRINTS H+-transporting ATPase (proton pump) signature 751 767 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 Pfam Ca2+-ATPase N terminal autoinhibitory domain 5 49 IPR024750 GO:0005516
Eupl01g00424 945 SMART Cation_ATPase_N_a_2 115 187 IPR004014 -
Eupl01g00424 945 NCBIfam HAD-IC family P-type ATPase 721 838 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 NCBIfam HAD-IC family P-type ATPase 202 473 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 NCBIfam HAD-IC family P-type ATPase 547 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Eupl01g00424 945 SUPERFAMILY HAD-like 449 856 IPR036412 -
Eupl01g00424 945 Pfam haloacid dehalogenase-like hydrolase 448 765 - -
Eupl01g00424 945 Gene3D - 165 884 - -
Eupl01g00424 945 FunFam Calcium-transporting ATPase 16 76 - -
Eupl01g00424 945 SUPERFAMILY Calcium ATPase, transmembrane domain M 117 935 IPR023298 -
Eupl01g00424 945 SFLD C1.7: P-type atpase like 432 803 - -
Eupl01g00424 945 Gene3D - 133 333 - -
Eupl01g00424 945 CDD P-type_ATPase_Ca_PMCA-like 142 883 - -
Eupl01g00424 945 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Eupl01g00424 945 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 660 IPR023299 GO:0000166
Eupl01g00424 945 Gene3D - 16 77 - -
Eupl01g00424 945 FunFam Calcium-transporting ATPase 165 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl01g00424 Eupl-Chr1 17467064 17493077 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl01g00424 57 930 Primary Pumps ATPases AT3G57330 72.374 0.0 1275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl01g00424 K01537 - psom:113309476 1410.59